Gene tag | Gene | Gene product | 3 hours incubation | 6 hours incubation | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Small intestine | Rectum | Small intestine | Rectum | Rumen | ||||||||
Log2FC | q-value | Log2FC | q-value | Log2FC | q-value | Log2FC | q-value | Log2FC | q-value | |||
Z2315 | acpD | FMN-dependent NADH-azoreductase | 2.53 | 7.91E-05 | 5.12 | 7.34E-17 | 3.16 | 6.19E-07 | 4.77 | 7.25E-15 | 2.38 | 2.65E-04 |
Z4492 | agaB | PTS system galactosamine-specific IIB component | NDE | Â | 3.01 | 2.87E-05 | NDE | Â | 3.27 | 2.44E-06 | NDE | Â |
Z4493 | agaC | PTS system galactosamine-specific IIC component | NDE | Â | 2.11 | 4.41E-03 | NDE | Â | 2.15 | 1.61E-03 | NDE | Â |
Z4487 | agaE | PTS system N-acetylgalactosamine-specific IID component | NDE | Â | 3.97 | 1.62E-10 | 2.60 | 4.74E-05 | 3.99 | 6.14E-11 | 2.44 | 1.35E-04 |
Z4488 | agaF | PTS system N-acetylgalactosamine-specific IIA component | NDE | Â | 3.23 | 1.41E-08 | NDE | Â | 3.20 | 7.02E-09 | NDE | Â |
Z4485 | agaV | PTS system N-acetylgalactosamine-specific IIB component | NDE | Â | 6.10 | 6.41E-23 | 3.22 | 5.89E-07 | 4.79 | 1.45E-14 | 2.52 | 1.40E-04 |
Z4486 | agaW | PTS system N-acetylgalactosamine-specific IIC component | NDE | Â | 5.36 | 7.49E-22 | 3.37 | 5.24E-09 | 5.06 | 1.66E-19 | 3.07 | 1.25E-07 |
Z4491 | agaY | Tagatose 1,6-diphosphate aldolase (GatY/KbaY subunit) | NDE | Â | 4.57 | 1.82E-13 | 2.54 | 7.96E-05 | 3.85 | 4.58E-10 | 2.69 | 2.25E-05 |
Z4484 | agaZ | Tagatose 1,6-diphosphate aldolase (GatZ/KbaZ subunit) | NDE | Â | 5.81 | 2.92E-18 | 2.54 | 4.57E-04 | 4.24 | 5.68E-10 | 2.30 | 1.52E-03 |
Z1396 | appB | Cytochrome bd oxidase subunit II | NDE | Â | NDE | Â | 3.90 | 6.57E-08 | NDE | Â | 3.18 | 1.60E-05 |
Z1395 | appC | Cytochrome bd ubiquinol oxidase subunit I | NDE | Â | NDE | Â | 4.33 | 7.02E-09 | NDE | Â | 3.60 | 2.31E-06 |
Z0070 | araA | L-arabinose isomerase | 2.79 | 2.22E-03 | NDE | Â | 3.14 | 6.37E-04 | 2.22 | 1.88E-02 | NDE | Â |
Z0072 | araB | L-ribulokinase | 3.80 | 7.49E-05 | 3.49 | 4.33E-04 | 3.65 | 1.74E-04 | 3.82 | 7.55E-05 | NDE | Â |
Z0069 | araD | L-ribulose 5-phosphate 4-epimerase | 2.81 | 1.03E-03 | NDE | Â | 2.26 | 1.19E-02 | NDE | Â | NDE | Â |
Z2954 | araF | L-arabinose transport system (substrate-binding protein) | 4.06 | 1.61E-05 | 2.69 | 8.44E-03 | 4.56 | 1.30E-06 | 4.13 | 1.41E-05 | NDE | Â |
Z2953 | araG | L-arabinose transport system (ATP-binding protein) | 2.57 | 6.40E-03 | NDE | Â | 3.08 | 1.08E-03 | 2.09 | 3.18E-02 | NDE | Â |
Z5245 | asnA | Aspartate ammonia-ligase | NDE | Â | 2.68 | 9.66E-04 | 3.11 | 8.23E-05 | 2.84 | 3.50E-04 | 3.05 | 1.14E-04 |
Z0821 | asnB | Asparagine synthase | NDE | Â | 2.84 | 2.54E-04 | NDE | Â | NDE | Â | NDE | Â |
Z5744 | aspA | Aspartate ammonia-lyase | 6.08 | 3.44E-23 | 5.03 | 8.65E-16 | 5.34 | 5.67E-18 | 2.84 | 1.33E-05 | 4.46 | 1.04E-12 |
Z5734 | cadA | Lysine decarboxylase | NDE | Â | NDE | Â | 2.81 | 1.61E-03 | NDE | Â | 3.33 | 1.21E-04 |
Z5735 | cadB | Cadaverine:lysine antiporter | NDE | Â | NDE | Â | 3.96 | 2.74E-05 | NDE | Â | 4.15 | 9.05E-06 |
Z3712 | cchB | Ethanolamine utilization protein EutN | NDE | Â | NDE | Â | 4.3 | 4.58E-04 | NDE | Â | 4.47 | 2.33E-04 |
Z0762 | citC | [citrate (pro-3S)-lyase] ligase | NDE | Â | NDE | Â | NDE | Â | NDE | Â | 2.02 | 8.56E-03 |
Z4278 | cmtB | Mannitol-specific IIA component | 2.35 | 4.79E-03 | 3.04 | 2.28E-04 | 2.10 | 1.38E-02 | 3.02 | 1.74E-04 | 2.04 | 1.38E-02 |
Z0901 | cydB | Cytochrome bd ubiquinol oxydase (subunit II) | 2.12 | 1.29E-04 | 2.37 | 2.32E-05 | NDE | Â | NDE | Â | NDE | Â |
Z4942 | dctA | Aerobic C4-dicarboxylates transporter | 4.13 | 1.21E-09 | 3.91 | 1.73E-08 | 3.35 | 1.60E-06 | 3.65 | 1.29E-07 | 2.11 | 3.99E-03 |
Z5743 | dcuA | Anaerobic C4-dicarboxylates transporter | 3.21 | 2.46E-08 | 2.51 | 2.73E-05 | 2.12 | 5.02E-04 | NDE | Â | NDE | Â |
Z5725 | dcuB | Anaerobic C4-dicarboxylates transporter | 2.98 | 2.64E-05 | 3.49 | 8.54E-07 | 3.26 | 4.39E-06 | NDE | Â | 2.11 | 4.48E-03 |
Z1240 | dmsA | Dimethyl sulfoxide reductase subunit A | 3.01 | 3.54E-07 | NDE | Â | 3.47 | 3.43E-09 | NDE | Â | 3.07 | 2.25E-07 |
Z1241 | dmsB | Dimethyl sulfoxide reductase subunit B | 3.48 | 6.54E-08 | NDE | Â | 3.56 | 3.63E-08 | NDE | Â | 2.97 | 6.04E-06 |
Z1242 | dmsC | Dimethyl sulfoxide reductase subunit C | 2.56 | 3.33E-05 | NDE | Â | 2.59 | 3.36E-05 | NDE | Â | 2.29 | 2.76E-04 |
Z3707 | eutA | Ethanolamine utilization protein EutA | NDE | Â | NDE | Â | 3.52 | 2.76E-03 | 2.75 | 2.10E-02 | 4.04 | 4.15E-04 |
Z3706 | eutB | Ethanolamine ammonia-lyase (large subunit) | NDE | Â | NDE | Â | 3.68 | 1.68E-03 | 3.12 | 8.17E-03 | 4.02 | 4.60E-04 |
Z3705 | eutC | Ethanolamine ammonia-lyase (small subunit) | NDE | Â | NDE | Â | 3.37 | 4.18E-03 | 2.79 | 1.85E-02 | 3.62 | 1.71E-03 |
Z3711 | eutE | Aldehyde dehydrogenase | NDE | Â | NDE | Â | 4.14 | 7.46E-04 | NDE | Â | 4.50 | 2.01E-04 |
Z3709 | eutG | Alcohol dehydrogenase | NDE | Â | NDE | Â | 3.87 | 1.59E-03 | NDE | Â | 4.42 | 2.15E-04 |
Z3708 | eutH | Ethanolamine transporter | NDE | Â | NDE | Â | 3.42 | 3.79E-03 | NDE | Â | 4.10 | 3.45E-04 |
Z3714 | eutI | Phosphotransacetylase | NDE | Â | NDE | Â | 4.19 | 4.95E-04 | NDE | Â | 4.51 | 1.43E-04 |
Z3710 | eutJ | Ethanolamine utilization protein EutJ | NDE | Â | NDE | Â | 3.64 | 3.76E-03 | NDE | Â | 4.25 | 4.99E-04 |
Z3703 | eutK | Ethanolamine utilization protein EutK | NDE | Â | NDE | Â | 3.22 | 6.41E-03 | 3.01 | 1.02E-02 | 3.52 | 2.29E-03 |
Z3704 | eutL | Ethanolamine utilization protein EutL | NDE | Â | NDE | Â | 3.28 | 5.36E-03 | 2.82 | 1.70E-02 | 3.51 | 2.40E-03 |
Z3713 | eutM | Ethanolamine utilization protein EutM | NDE | Â | NDE | Â | 4.37 | 2.51E-04 | NDE | Â | 4.64 | 8.61E-05 |
Z3717 | eutP | Ethanolamine utilization protein EutP | NDE | Â | NDE | Â | 3.80 | 1.76E-03 | 2.69 | 3.04E-02 | 4.33 | 2.60E-04 |
Z3716 | eutQ | Ethanolamine utilization protein EutQ | NDE | Â | NDE | Â | 3.87 | 1.56E-03 | NDE | Â | 4.25 | 3.92E-04 |
Z3718 | eutS | Ethanolamine utilization protein EutS | NDE | Â | NDE | Â | 3.63 | 2.93E-03 | 3.27 | 7.36E-03 | 4.54 | 1.17E-04 |
Z2236 | fdnG | Formate dehydrogenase-N (α subunit) | NDE |  | NDE |  | 2.73 | 6.18E-06 | 3.48 | 3.63E-09 | 2.06 | 9.55E-04 |
Z2235 | fdnH | Formate dehydrogenase-N (β subunit) | 3.63 | 5.60E-08 | NDE |  | NDE |  | NDE |  | NDE |  |
Z2234 | fdnI | Formate dehydrogenase-N (Îł subunit) | 3.02 | 2.25E-09 | NDE | Â | NDE | Â | NDE | Â | NDE | Â |
Z5435 | fdoH | Formate dehydrogenase-I (iron-sulfur subunit) | NDE | Â | NDE | Â | 3.2 | 2.40E-06 | 3.92 | 3.75E-09 | 2.51 | 3.15E-04 |
Z5434 | fdoI | Formate dehydrogenase-I (Îł subunit) | NDE | Â | NDE | Â | 2.84 | 2.29E-05 | 3.53 | 6.94E-08 | 2.11 | 2.25E-03 |
Z5762 | frdA | Fumarate reductase (flavoprotein subunit) | 4.43 | 1.26E-12 | 2.24 | 9.63E-04 | 4.70 | 4.78E-14 | 2.02 | 3.04E-03 | 4.03 | 1.64E-10 |
Z5760 | frdB | Fumarate reductase (iron-sulfur subunit) | 4.90 | 4.39E-12 | 2.28 | 3.74E-03 | 4.88 | 6.63E-12 | NDE | Â | 4.17 | 7.12E-09 |
Z5759 | frdC | Fumarate reductase (C subunit) | 4.92 | 3.51E-11 | 2.27 | 6.14E-03 | 4.57 | 1.13E-09 | NDE | Â | 3.83 | 5.31E-07 |
Z5758 | frdD | Fumarate reductase (D subunit) | 4.85 | 1.93E-10 | 2.51 | 2.61E-03 | 4.04 | 1.93E-07 | NDE | Â | 3.20 | 5.72E-05 |
Z3425 | fruA | PTS system fructose-specific IIB component | 2.95 | 3.71E-04 | 2.44 | 5.39E-03 | NDE | Â | NDE | Â | NDE | Â |
Z3427 | fruB | PTS system fructose-specific IIA component | 3.24 | 4.31E-04 | 2.67 | 6.21E-03 | 2.59 | 7.71E-03 | NDE | Â | NDE | Â |
Z3426 | fruK | 1-phosphofructokinase | 3.38 | 1.07E-04 | 2.76 | 2.79E-03 | 2.12 | 2.73E-02 | NDE | Â | NDE | Â |
Z4117 | fucA | L-fuculose-phosphate aldolase | 3.99 | 4.76E-07 | 4.06 | 4.41E-07 | 3.45 | 1.86E-05 | 4.24 | 7.00E-08 | 2.69 | 1.14E-03 |
Z4119 | fucI | L-fucose/D-arabinose isomerase | 4.12 | 5.83E-08 | 4.47 | 5.45E-09 | 2.87 | 3.07E-04 | 5.40 | 4.28E-13 | NDE | Â |
Z4120 | fucK | L-fuculokinase | 2.50 | 3.90E-04 | 2.37 | 1.16E-03 | NDE | Â | 3.34 | 1.32E-06 | NDE | Â |
Z4116 | fucO | Lactaldehyde reductase | 3.22 | 1.17E-08 | 3.36 | 6.44E-06 | 3.39 | 4.25E-06 | 3.92 | 6.72E-08 | 2.91 | 9.95E-05 |
Z4118 | fucP | L-fucose permease | 3.62 | 5.13E-07 | 4.44 | 7.68E-10 | 2.62 | 5.68E-04 | 5.13 | 3.02E-13 | NDE | Â |
Z4121 | fucU | L-fucose mutarotase | NDE | Â | NDE | Â | NDE | Â | 2.05 | 1.07E-03 | NDE | Â |
Z2615 | fumA | Fumarase | 3.90 | 5.07E-19 | 3.35 | 7.45E-14 | 3.50 | 2.06E-15 | 3.53 | 1.57E-15 | 2.50 | 3.54E-08 |
Z5724 | fumB | Fumarate hydratase class I | 3.57 | 1.16E-05 | 3.72 | 6.56E-06 | 3.76 | 4.38E-06 | NDE | Â | 2.68 | 1.56E-03 |
Z2614 | fumC | Fumarate hydratase class II | 2.99 | 4.63E-10 | 2.19 | 1.31E-05 | 2.46 | 4.60E-07 | NDE | Â | NDE | Â |
Z0462 | fusK | Fucose sensing two-component system (sensor) | NDE | Â | 3.12 | 3.86E-17 | NDE | Â | 2.45 | 5.35E-11 | NDE | Â |
Z0463 | fusR | Fucose sensing two-component system (regulator) | 3.37 | 2.15E-09 | 3.81 | 1.78E-11 | NDE | Â | 3.58 | 2.40E-10 | NDE | Â |
Z0927 | galK | Galactokinase | 2.55 | 1.80E-05 | 3.50 | 2.71E-09 | NDE | Â | NDE | Â | NDE | Â |
Z0926 | galM | Aldolase-1-epimerase | 2.04 | 6.59E-04 | 2.62 | 1.02E-05 | NDE | Â | NDE | Â | NDE | Â |
Z4288 | galP | MFS transporter galactose:H+ symporter | 3.23 | 1.20E-04 | 4.66 | 1.82E-08 | NDE | Â | 2.75 | 1.54E-03 | NDE | Â |
Z0928 | galT | Galactose-1-phosphate uridylyltransferase | 3.24 | 7.98E-07 | 4.58 | 1.59E-12 | NDE | Â | 2.92 | 1.32E-05 | NDE | Â |
Z3499 | glpA | Glycerol 3-phosphate dehydrogenase (a subunit) | 4.13 | 3.90E-06 | 2.50 | 1.07E-02 | 5.21 | 4.03E-09 | 3.42 | 2.20E-04 | 4.15 | 4.64E-06 |
Z3500 | glpB | Glycerol 3-phosphate dehydrogenase (b subunit) | 4.33 | 4.60E-06 | NDE | Â | 5.01 | 1.05E-07 | 2.20 | 3.19E-02 | 3.77 | 1.06E-04 |
Z3501 | glpC | Glycerol 3-phosphate dehydrogenase (c subunit) | 3.91 | 2.15E-05 | NDE | Â | 3.84 | 4.04E-05 | NDE | Â | 2.51 | 1.03E-02 |
Z4786 | glpD | Glycerol 3-phosphate dehydrogenase | 3.62 | 8.99E-05 | 2.65 | 7.55E-03 | 4.98 | 4.13E-08 | 4.75 | 1.79E-07 | 4.23 | 4.61E-06 |
Z5472 | glpF | Glycerol uptake facilitator protein | 4.02 | 3.20E-09 | 3.66 | 1.38E-07 | 4.02 | 4.65E-09 | 5.33 | 2.65E-15 | 2.63 | 2.44E-04 |
Z5471 | glpK | Glycerol kinase | 3.80 | 3.61E-06 | 2.89 | 8.21E-04 | 3.87 | 3.11E-06 | 4.33 | 1.20E-07 | 2.38 | 6.39E-03 |
Z3498 | glpT | Glycerol 3-phosphate transporter | 5.65 | 1.72E-09 | 3.47 | 5.41E-04 | 5.44 | 8.86E-09 | 3.71 | 1.57E-04 | 4.05 | 3.23E-05 |
Z4805 | gntK | Gluconokinase | NDE | Â | 2.44 | 3.04E-04 | NDE | Â | NDE | Â | NDE | Â |
Z5919 | gntP | High-affinity gluconate transporter | 5.85 | 5.74E-16 | 3.17 | 4.16E-05 | NDE | Â | NDE | Â | NDE | Â |
Z4770 | gntT | Gnt-I system high-affinity gluconate transporter | NDE | Â | 2.52 | 1.95E-07 | NDE | Â | NDE | Â | NDE | Â |
Z4804 | gntU | Gnt-I system low-affinity gluconate transporter | NDE | Â | 2.35 | 1.99E-03 | NDE | Â | NDE | Â | NDE | Â |
Z1076 | grxA | Glutaredoxin 1 | 2.97 | 1.14E-06 | 5.31 | 2.61E-19 | 3.99 | 2.46E-11 | 4.51 | 3.83E-14 | 4.00 | 2.26E-11 |
Z4879 | hpR | Phosphocarrier protein | NDE | Â | NDE | Â | 2.56 | 5.73E-04 | 2.14 | 7.02E-03 | 2.32 | 1.63E-03 |
Z1389 | hyaA | Hydrogenase I (small subunit) | 2.62 | 3.08E-03 | 2.51 | 6.62E-03 | 6.24 | 3.71E-14 | 2.38 | 8.91E-03 | 5.66 | 9.23E-12 |
Z1390 | hyaB | Hydrogenase I (large subunit) | 2.58 | 3.41E-03 | 2.48 | 6.98E-03 | 6.32 | 1.14E-14 | 2.72 | 2.20E-03 | 5.69 | 5.17E-12 |
Z1391 | hyaC | Hydrogenase I (B-type cytochrome subunit) | 2.31 | 9.30E-03 | 2.39 | 9.57E-03 | 5.77 | 1.92E-12 | 2.45 | 6.16E-03 | 5.05 | 1.15E-09 |
Z1392 | hyaD | Hydrogenase I (maturation protease) | 2.22 | 1.16E-03 | 2.42 | 7.60E-03 | 5.47 | 1.45E-11 | 2.29 | 9.99E-03 | 4.81 | 4.38E-09 |
Z4350 | hybA | Hydrogenase-2 (small subunit) | 4.01 | 6.41E-09 | 2.92 | 5.37E-05 | 2.77 | 1.24E-04 | NDE | Â | 2.27 | 2.01E-03 |
Z4349 | hybB | Ni/Fe component of hydrogenase-2 | 4.24 | 1.21E-09 | 3.13 | 1.59E-05 | 2.86 | 8.54E-05 | NDE | Â | 2.27 | 2.36E-03 |
Z4348 | hybC | Hydrogenase-2 (large subunit) | 3.83 | 3.42E-08 | 2.8 | 1.09E-04 | 2.65 | 2.71E-04 | NDE | Â | 2.00 | 7.53E-03 |
Z4347 | hybD | Hydrogenase maturation protease | 3.39 | 1.11E-06 | 2.33 | 1.68E-03 | 2.22 | 2.74E-03 | NDE | Â | NDE | Â |
Z5632 | malE | Maltose/maltodextrin transport system (substrate-binding protein) | NDE | Â | 3.22 | 4.60E-05 | NDE | Â | 2.41 | 3.70E-03 | NDE | Â |
Z5631 | malF | Maltose/maltodextrin transport system (permease protein) | NDE | Â | 2.71 | 9.82E-06 | NDE | Â | NDE | Â | NDE | Â |
Z5630 | malG | Maltose/maltodextrin transport system (permease protein) | NDE | Â | 2.79 | 3.81E-05 | NDE | Â | NDE | Â | NDE | Â |
Z5633 | malK | Multiple sugar transport system (ATP-binding protein) | NDE | Â | 3.99 | 7.37E-08 | NDE | Â | 2.36 | 3.38E-03 | NDE | Â |
Z2860 | manX | PTS system mannose-specific IIAB component | NDE | Â | 2.69 | 4.64E-08 | NDE | Â | NDE | Â | NDE | Â |
Z2861 | manY | PTS system mannose-specific IIC component | NDE | Â | 2.81 | 5.05E-09 | NDE | Â | NDE | Â | NDE | Â |
Z2862 | manZ | PTS system mannose-specific IID component | NDE | Â | 2.66 | 1.49E-07 | NDE | Â | NDE | Â | NDE | Â |
Z3404 | mglA | Methyl-galactoside transport system (ATP-binding protein) | 2.98 | 5.30E-04 | 4.04 | 1.89E-06 | 2.84 | 1.28E-03 | 3.38 | 8.10E-05 | NDE | Â |
Z3405 | mglB | Methyl-galactoside transport system (substrate-binding protein) | 3.75 | 1.06E-06 | 4.77 | 4.85E-10 | 2.76 | 6.21E-04 | 4.09 | 1.00E-07 | NDE | Â |
Z3403 | mglC | Methyl-galactoside transport system (permease protein) | 3.02 | 4.18E-05 | 3.33 | 7.49E-06 | 3.06 | 4.16E-05 | 2.85 | 1.52E-04 | NDE | Â |
Z0824 | nagA | N-acetylglucosamine 6-phosphate deacetylase | 2.37 | 7.39E-06 | 2.95 | 2.19E-08 | NDE | Â | NDE | Â | NDE | Â |
Z0825 | nagB | Glucosamine 6-phosphate deaminase | 3.44 | 1.74E-07 | 4.49 | 7.20E-12 | NDE | Â | NDE | Â | NDE | Â |
Z0826 | nagE | PTS system N-acetylglucosamine-specific IIABC component | 3.31 | 4.52E-08 | 4.11 | 9.49E-12 | NDE | Â | 2.25 | 3.91E-04 | NDE | Â |
Z4583 | nanA | N-acetylneuraminate lyase | 7.79 | 1.62E-18 | 5.14 | 2.72E-08 | 3.55 | 2.07E-04 | 5.90 | 8.61E-11 | NDE | Â |
Z4582 | nanT | Sialic acid transporter | 6.32 | 1.03E-13 | 3.85 | 1.80E-05 | 2.30 | 1.71E-02 | 5.18 | 2.28E-09 | NDE | Â |
Z3463 | napA | Nitrate reductase (catalytic subunit) | 2.78 | 2.25E-07 | NDE | Â | 2.66 | 1.03E-06 | NDE | Â | 2.77 | 3.14E-07 |
Z3460 | napB | Cytochrome v-type protein NapB | NDE | Â | NDE | Â | 2.35 | 4.67E-03 | 2.24 | 7.15E-03 | NDE | Â |
Z3461 | napH | Ferredoxin-type protein NapH | NDE | Â | NDE | Â | 2.33 | 3.08E-03 | NDE | Â | 2.15 | 6.29E-03 |
Z2001 | narG | Nitrate reductase (α subunit) | NDE |  | NDE |  | 4.50 | 1.93E-23 | NDE |  | 4.97 | 1.46E-28 |
Z2002 | narH | Nitrate reductase (β subunit) | NDE |  | NDE |  | 2.97 | 2.34E-15 | NDE |  | 3.36 | 1.58E-19 |
Z2004 | narI | Nitrate reductase (Îł subunit) | NDE | Â | NDE | Â | 2.95 | 8.43E-11 | NDE | Â | 3.30 | 2.02E-13 |
Z2003 | narJ | Nitrate reductase molybdenum cofactor | NDE | Â | NDE | Â | 3.23 | 3.23E-11 | NDE | Â | 3.67 | 2.51E-14 |
Z4726 | nirB | Nitrite reductase (large subunit) | NDE | Â | NDE | Â | NDE | Â | NDE | Â | 2.06 | 9.01E-07 |
Z5671 | nrfC | Nitrite reductase (formate-dependent) | NDE | Â | NDE | Â | 5.35 | 1.49E-13 | 2.63 | 8.52E-04 | 5.20 | 7.59E-13 |
Z5673 | nrfE | Cytochrome c-type biogenesis protein NrfE | NDE | Â | NDE | Â | 3.43 | 2.08E-06 | NDE | Â | 3.35 | 3.59E-06 |
Z5674 | nrfF | Formate-dependent nitrite reductase complex subunit NrfF | NDE | Â | NDE | Â | 3.02 | 1.58E-04 | NDE | Â | 3.06 | 1.23E-04 |
Z5675 | nrfG | Formate-dependent nitrite reductase complex subunit NrfG | NDE | Â | NDE | Â | 2.68 | 4.04E-05 | NDE | Â | 2.78 | 1.73E-05 |
Z3541 | nuoH | NADH-quinone oxidoreductase subunit H | NDE | Â | NDE | Â | NDE | Â | 2.45 | 5.24E-04 | NDE | Â |
Z3540 | nuoI | NADH-quinone oxidoreductase subunit I | NDE | Â | NDE | Â | 2.04 | 5.31E-03 | 2.72 | 9.55E-05 | NDE | Â |
Z3539 | nuoJ | NADH-quinone oxidoreductase subunit J | NDE | Â | NDE | Â | 2.02 | 5.51E-03 | 2.82 | 1.86E-05 | NDE | Â |
Z3538 | nuoK | NADH-quinone oxidoreductase subunit K | NDE | Â | NDE | Â | NDE | Â | 2.89 | 4.64E-06 | NDE | Â |
Z3537 | nuoL | NADH-quinone oxidoreductase subunit L | NDE | Â | NDE | Â | NDE | Â | 2.76 | 1.98E-05 | NDE | Â |
Z3536 | nuoM | NADH-quinone oxidoreductase subunit M | NDE | Â | NDE | Â | NDE | Â | 3.04 | 1.26E-06 | NDE | Â |
Z4758 | pckA | Phosphoenolpyruvate carboxykinase | 3.54 | 2.78E-10 | 2.60 | 8.68E-06 | 2.86 | 6.67E-07 | 3.44 | 1.30E-09 | NDE | Â |
Z3401 | preT | Dihydropyrimidine dehydrogenase | 2.94 | 2.12E-06 | 2.48 | 1.19E-04 | 6.46 | 4.01E-28 | 2.32 | 3.81E-04 | 5.40 | 9.99E-20 |
Z3980 | proW | Glycine betaine/proline transport system | 2.36 | 8.30E-03 | NDE | Â | NDE | Â | -2.58 | 4.47E-03 | NDE | Â |
Z3981 | proX | Glycine betaine/proline transport system | 2.74 | 6.12E-04 | NDE | Â | NDE | Â | -2.1 | 1.24E-02 | NDE | Â |
Z3653 | ptsN | PTS system fructose-specific IIB-like component | NDE | Â | NDE | Â | NDE | Â | NDE | Â | 2.55 | 4.69E-03 |
Z5250 | rbsA | Ribose transport system ATP-binding protein | 6.24 | 4.46E-23 | 5.83 | 7.52E-20 | 2.84 | 2.63E-05 | 5.80 | 9.53E-20 | 4.60 | 9.20E-13 |
Z5252 | rbsB | Ribose transport system substrate-binding protein | 4.23 | 1.81E-08 | 2.16 | 9.34E-03 | NDE | Â | 2.59 | 1.10E-03 | NDE | Â |
Z5251 | rbsC | Ribose transport system permease protein | 6.49 | 5.50E-29 | 5.18 | 2.95E-18 | 4.04 | 1.99E-11 | 6.28 | 1.33E-26 | 5.00 | 3.27E-17 |
Z5249 | rbsD | D-ribose pyranase | 6.17 | 2.40E-23 | 5.28 | 5.82E-17 | 3.40 | 1.91E-07 | 6.10 | 2.29E-22 | 4.81 | 3.25E-14 |
Z5253 | rbsK | Ribokinase | 3.82 | 6.03E-12 | 2.13 | 3.67E-04 | NDE | Â | 2.81 | 9.77E-07 | NDE | Â |
Z2857 | sdaA | L-serine dehydratase | 2.18 | 2.59E-15 | NDE | Â | 2.46 | 3.92E-19 | 2.47 | 4.52E-19 | 2.25 | 3.44E-16 |
Z4114 | sdaB | L-serine dehydratase (deaminase) | 4.36 | 2.42E-18 | 2.93 | 1.87E-08 | NDE | Â | NDE | Â | NDE | Â |
Z4113 | sdaC | Serine transporter | 4.59 | 1.85E-30 | 3.72 | 8.52E-20 | NDE | Â | 2.39 | 1.43E-08 | NDE | Â |
Z0877 | sdhA | Succinate dehydrogenase (flavoprotein subunit) | NDE | Â | NDE | Â | NDE | Â | 2.12 | 5.16E-03 | NDE | Â |
Z0878 | sdhB | Succinate dehydrogenase (iron-sulfur subunit) | NDE | Â | NDE | Â | NDE | Â | 2.10 | 1.39E-02 | NDE | Â |
Z0876 | sdhD | Succinate dehydrogenase (membrane anchor subunit) | NDE | Â | NDE | Â | NDE | Â | 2.04 | 2.05E-03 | NDE | Â |
Z0880 | sucA | 2-oxoglutarate dehydrogenase E1 component | NDE | Â | NDE | Â | NDE | Â | 2.60 | 6.80E-04 | NDE | Â |
Z0881 | sucB | 2-oxoglutarate dehydrogenase E2 component | NDE | Â | NDE | Â | NDE | Â | 2.91 | 3.11E-04 | NDE | Â |
Z0882 | sucC | Succinyl-CoA synthetase (β subunit) | NDE |  | NDE |  | NDE |  | 2.93 | 2.18E-04 | NDE |  |
Z0883 | sucD | Succinyl-CoA synthetase (α subunit) | NDE |  | NDE |  | NDE |  | 2.89 | 1.78E-04 | NDE |  |
Z5501 | talC | Fructose 6-phosphate aldolase 2 | 2.45 | 3.24E-05 | NDE | Â | 2.61 | 1.21E-05 | NDE | Â | 2.16 | 3.41E-04 |
Z4469 | tdcB | Threonine dehydratase | 6.04 | 1.04E-09 | NDE | Â | 6.43 | 7.98E-11 | NDE | Â | 4.56 | 8.29E-06 |
Z4468 | tdcC | Threonine/serine transporter | 4.99 | 3.98E-07 | NDE | Â | 5.02 | 3.93E-07 | NDE | Â | 3.14 | 2.54E-03 |
Z4467 | tdcD | Propionate kinase | 5.22 | 2.18E-07 | NDE | Â | 5.89 | 4.20E-09 | 2.29 | 3.87E-02 | 4.22 | 4.89E-05 |
Z4466 | tdcE | Formate C-acetyltransferase | 4.54 | 3.69E-05 | NDE | Â | 5.05 | 4.69E-06 | 2.43 | 4.10E-02 | 3.79 | 8.59E-04 |
Z5203 | tnaA | Tryptophanase | 3.16 | 6.15E-03 | NDE | Â | 4.73 | 2.43E-05 | 2.48 | 3.88E-02 | 3.62 | 1.69E-03 |
Z5204 | tnaB | Low affinity tryptophan permease | NDE | Â | NDE | Â | 3.28 | 2.20E-05 | NDE | Â | NDE | Â |
Z4444 | uxaA | Altronate hydrolase | 5.41 | 1.05E-13 | 3.97 | 1.52E-07 | NDE | Â | NDE | Â | NDE | Â |
Z2184 | uxaB | Tagaturonate reductase | 4.08 | 9.81E-13 | 2.19 | 3.95E-04 | NDE | Â | NDE | Â | NDE | Â |
Z4445 | uxaC | Glucuronate isomerase | 6.19 | 2.40E-19 | 4.89 | 4.88E-12 | NDE | Â | NDE | Â | NDE | Â |
Z5920 | uxuA | Mannonate hydrolase | 7.50 | 3.08E-25 | 5.27 | 1.83E-12 | 2.86 | 2.82E-04 | 2.46 | 1.98E-03 | NDE | Â |
Z5921 | uxuB | Mannonate oxidoreductase | 6.68 | 2.40E-22 | 4.21 | 4.35E-09 | 2.41 | 1.52E-03 | NDE | Â | NDE | Â |
Z4990 | xylA | Xylose isomerase | NDE | Â | 3.45 | 4.67E-07 | 3.22 | 2.57E-06 | 4.60 | 3.99E-12 | 2.04 | 4.53E-03 |
Z4989 | xylB | Xylulokinase | NDE | Â | 2.02 | 5.33E-03 | NDE | Â | 2.85 | 2.43E-05 | NDE | Â |
Z4991 | xylF | D-xylose transport system (substrate-binding protein) | NDE | Â | 4.83 | 3.40E-09 | 3.48 | 2.93E-05 | 5.77 | 3.03E-13 | 2.54 | 3.06E-03 |
Z4992 | xylG | D-xylose transport system (ATP-binding protein) | NDE | Â | NDE | Â | NDE | Â | 2.08 | 4.14E-03 | NDE | Â |
Z4993 | xylH | D-xylose transport system (permease protein) | NDE | Â | NDE | Â | 2.03 | 1.36E-03 | 2.07 | 1.01E-03 | NDE | Â |
Z5717 | yjdE | Arginine:agmatine antiporter | 2.43 | 8.29E-03 | NDE | Â | 3.76 | 1.94E-05 | NDE | Â | 3.19 | 3.64E-04 |
Z0461 | z0461 | Fucose transporter (optimal import) | 2.66 | 1.23E-03 | 3.00 | 3.12E-04 | 2.33 | 6.92E-03 | 4.75 | 1.65E-09 | NDE | 3.61E-04 |
Z1245 | z1245 | Putative transporter | NDE | Â | NDE | Â | 2.02 | 1.93E-03 | NDE | Â | 2.93 | 9.54E-05 |
Z2575 | z2575 | Tat-targeted selenite reductase subunit YnfE | 2.86 | 2.35E-05 | NDE | Â | 2.97 | 1.35E-05 | NDE | Â | 2.68 | 2.24E-04 |
Z2576 | z2576 | Tat-targeted selenite reductase subunit YnfF | 2.55 | 1.58E-04 | NDE | Â | 3.31 | 7.19E-07 | NDE | 1.65E-09 | 2.57 | 3.61E-04 |
Z2577 | z2577 | Tat-targeted selenite reductase subunit YnfG | 2.75 | 2.04E-04 | 2.04 | 1.04E-02 | 3.44 | 3.00E-06 | NDE | Â | 2.78 | 5.41E-04 |
Z3394 | z3394 | MFS transporter | NDE | Â | 2.75 | 9.22E-03 | 2.42 | 2.39E-02 | 4.54 | Â | 3.92 | 4.73E-03 |
Z3715 | z3715 | Ethanolamine utilization cobalamin adenosyltransferase | NDE | Â | NDE | Â | 3.94 | 1.25E-03 | NDE | 6.32E-05 | 4.28 | 4.33E-11 |
Z4207 | z4207 | Xanthine dehydrogenase iron-sulfur-binding subunit | NDE | Â | NDE | Â | 2.86 | 2.14E-06 | NDE | Â | 2.15 | 1.85E-04 |
Z4464 | z4464 | L-serine dehydratase | 4.15 | 1.51E-04 | NDE | Â | 4.25 | 1.30E-04 | NDE | Â | 3.22 | 1.87E-06 |
Z4875 | z4875 | PTS system galactitol-specific IIA component | 2.44 | 8.99E-06 | NDE | Â | 3.84 | 2.25E-12 | 2.36 | 1.45E-05 | 3.61 | 3.91E-09 |
Z4876 | z4876 | PTS system galactitol-specific IIB component | 2.98 | 2.87E-07 | NDE | Â | 3.79 | 6.23E-11 | 2.68 | Â | 3.43 | Â |
Z4877 | z4877 | PTS system galactitol-specific IIC component | 2.22 | 2.94E-05 | NDE | Â | 2.37 | 6.12E-06 | NDE | 3.13E-06 | NDE | 7.53E-05 |