CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes

Table 10 Newbler assembly statistics of the bins reported by each tools on the hot spring metagenome. It also shows the time it took each tool to create the bins

Tool	Total Bins	Total reads	Large contigs	Expected genome size (Mbp)	AVG contig length (bp)	Largest contig (bp)	N50	GC (%)	Time (m)
CLAME	2	380,846	178	3.03	17,067	99,748	31,130	71	9
CLAME	2	446	24	25,157	1048	2791	1054	66.17	9
BiMeta	5	113,070	2131	2.3	1082	28,701	1077	65	211
		22,877	728	0.6	867	6907	860	38
		273,565	995	2.98	3002	49,922	11,620	72
		283,509	3499	5.95	1701	45,994	2185	70
		207,349	3857	9.73	2523	41,372	4961	51
MetaProb	5	275,160	3423	5	1460	53,631	1561	69	21
		60,580	1350	1.3	966	11,767	966	58
		204,718	4262	9.45	2217	29,837	4059	51
		47,618	766	0.7	901	6858	898	61
		312,294	1486	4.7	3149	63,982	6146	72
AbundanceBin	3	459,353	950	3.7	3876	75,296	12,564	69	1063
		190,112	6574	8.1	1240	8964	1475	56
		250,905	8938	8.6	968	4762	1005	62
MetaBinG	3	521,865	7765	9.8	1253	30,729	1278	66	131
		212,100	3115	4.6	1480	9988	1829	71
		125,979	4764	6.7	1400	13,502	1647	51

ISSN: 1471-2164