Table 6 Assembler statistic reported by each tool on the original hot spring dataset, without binning
Total large contigs (> 500 bp) | Reads assembled | Largest contig (bp) | Expected genome size (Mbp) | N50 | AVG contig length (bp) | Peak depth | GC (%) | |
|---|---|---|---|---|---|---|---|---|
Newbler | 11,739 | 804,983 (87%) | 232,982 | 27 | 3267 | 2349 | 2.1 | 61 |
Ray | 12,369 | 768,803 (83%) | 72,115 | 14 | 1143 | 1134 | 4.8 | 61 |
MetaVelvet | 17,720 | 797,792 (86%) | 7084 | 19 | 1199 | 1104 | 2.6 | 61 |