Skip to main content

Table 6 Assembler statistic reported by each tool on the original hot spring dataset, without binning

From: CLAME: a new alignment-based binning algorithm allows the genomic description of a novel Xanthomonadaceae from the Colombian Andes

  Total large contigs (> 500 bp) Reads assembled Largest contig (bp) Expected genome size (Mbp) N50 AVG contig length (bp) Peak depth GC (%)
Newbler 11,739 804,983 (87%) 232,982 27 3267 2349 2.1 61
Ray 12,369 768,803 (83%) 72,115 14 1143 1134 4.8 61
MetaVelvet 17,720 797,792 (86%) 7084 19 1199 1104 2.6 61