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Fig. 5 | BMC Genomics

Fig. 5

From: Whole genome sequencing of Trypanosoma cruzi field isolates reveals extensive genomic variability and complex aneuploidy patterns within TcII DTU

Fig. 5

Chromosomal copy number variation among the T. cruzi DTUs and field isolates. The CCNV for each T. cruzi strain was performed based on the median coverage of all T. cruzi genes, excluding those belonging to the largest multigene families, normalized by the genome coverage. In this heatmap, a dark-blue, light blue, yellow, orange and red boxes correspond to, respectively, ~ 1; ~ 2; ~ 3; ~ 4 and ~ 5 chromosomal copies. Each line corresponds to one T. cruzi chromosome, numbered from 1 to 41, while each column represents a T. cruzi strain/isolate, in this order: TcI: Arequipa, Colombiana, Sylvio; TcII: S11, S15, S23b, S44a, S92a, S154a, S162a, Ycl2, Ycl4,Ycl6, Ypop, Esmeraldo; TcIII: 231; TcV: 9280; TcVI: CL Brener, Tulahuen

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BMC Genomics

ISSN: 1471-2164

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