Transcriptome profiling of two contrasting ornamental cabbage (Brassica oleracea var. acephala) lines provides insights into purple and white inner leaf pigmentation

Table 1 Overview of the ornamental cabbage transcriptome sequencing and assembly

Samples	Raw reads	Clean reads	Total mapped	Uniquely mapped	Reads, (+) strand	Reads, (−) strand	Splice reads
A	48,616,346	47,218,458 (97.1%)	41,796,549 (88.5%)	26,457,182 (56.0%)	13,228,359	13,228,823	8,422,139 (17.8%)
B	63,594,196	61,710,694 (97.0%)	54,668,668 (88.6%)	32,846,826 (53.2%)	16,420,999	16,425,827	10,265,355 (16.6%)
C	54,803,312	53,317,796 (97.3%)	45,812,394 (85.9%)	43,866,847 (82.3%)	21,956,864	21,909,983	15,395,923 (28.9%)
D	55,090,242	53,553,210 (97.2%)	47,042,034 (87.8%)	30,613,710 (57.2%)	15,297,123	15,316,587	9,825,925 (18.3%)
E	57,545,108	56,073,384 (97.4%)	47,979,679 (85.6%)	42,350,520 (75.5%)	21,187,624	21,162,896	15,050,563 (26.8%)
F	69,494,170	67,872,830 (97.7%)	57,395,716 (84.6%)	53,001,197 (78.1%)	26,566,170	26,435,027	18,136,612 (26.7%)
Total	349,143,374	339,746,372
	Transcript	Gene
Total number	46,744	46,744

ISSN: 1471-2164