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Table 5 Transition vs transversion mutation rate, type and ratio determined from the transcriptomes of RGC-1066 and M-83 varieties of guar

From: Identification and characterization of SSR, SNP and InDel molecular markers from RNA-Seq data of guar (Cyamopsis tetragonoloba, L. Taub.) roots

Transition type

Occurance/Numbera

Percent occurance (%)

A/G

865

17.8

C/T

585

12.04

G/A

673

13.9

T/C

910

18.7

Transversion type

Occurance/Numbera

Percent occurance (%)

A/C

206

4.2

A/T

297

6.1

C/G

202

4.1

G/T

214

4.4

C/A

232

4.8

T/A

275

5.6

G/C

140

2.9

T/G

237

4.9

Transition/Transversion ratio: 1.72

  1. aOut of 4907 SNPs