Table 2 Putative effectors identified through regular expression and HMMs
From: Comparative genomics of downy mildews reveals potential adaptations to biotrophy
Category | R13 | R14 |
|---|---|---|
RxLR-[DE][DE][ER] | 33 | 34 |
[GHQ]xLR-[DE][DE][ER] | 7 | 7 |
RxL[GKQ]-[DE][DE][ER] | 14 | 12 |
RxLR-WY | 12 | 12 |
[GHQ]xLR-WY | 0 | 0 |
RxL[GKQ]-WY | 1 | 0 |
RxLR-[DE][DE][ER]-WY | 24 | 20 |
[GHQ]xLR-[DE][DE][ER]-WY | 1 | 0 |
RxL[GKQ]-[DE][DE][ER]-WY | 1 | 2 |
Total | 93 | 87 |
CRN (Secreted) | 20 (8) | 20 (5) |