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Table 1 Number of variants (millions) called per accession from WGS data (% indel calls)

From: DAWN: a resource for yielding insights into the diversity among wheat genomes

Accession PASS Het LowQualHom LowQualHet
ACBarrie 15.51 (4.0%) 3.87 (2.1%) 4.85 (6.1%) 3.06 (2.0%)
Alsen 22.90 (3.9%) 2.14 (3.9%) 5.15 (8.2%) 3.31 (3.3%)
Baxter 26.44 (4.6%) 4.99 (2.9%) 3.91 (8.8%) 5.05 (2.4%)
Chara 21.59 (4.6%) 4.31 (2.6%) 3.77 (8.5%) 7.16 (1.4%)
Drysdale 23.29 (4.3%) 2.29 (3.4%) 3.67 (10.1%) 1.80 (3.5%)
Excalibur 22.48 (3.9%) 2.75 (3.1%) 3.69 (9.6%) 5.52 (2.3%)
Gladius 23.90 (4.3%) 2.48 (3.1%) 3.41 (10.8%) 2.53 (2.4%)
H45 20.94 (4.2%) 2.88 (2.9%) 3.76 (9.4%) 4.59 (1.6%)
Kukri 17.21 (3.9%) 4.43 (4.1%) 3.13 (8.9%) 2.69 (3.6%)
Pastor 19.52 (4.2%) 5.44 (2.8%) 4.21 (8.0%) 5.56 (2.2%)
RAC875 29.25 (5.0%) 3.23 (3.9%) 2.75 (11.2%) 2.22 (4.4%)
Volcanii 20.28 (4.0%) 2.81 (3.3%) 5.61 (7.2%) 6.87 (2.5%)
Westonia 20.49 (4.5%) 3.50 (3.7%) 4.11 (8.6%) 4.67 (3.2%)
Wyalkatchem 26.67 (5.0%) 2.69 (3.8%) 3.14 (9.4%) 1.73 (3.7%)
Xiaoyan 15.43 (4.4%) 6.30 (1.7%) 3.62 (8.3%) 11.90 (1.1%)
Yitpi 19.59 (4.6%) 7.84 (1.6%) 3.45 (9.3%) 11.77 (1.1%)
Chinese spring 0.09 (26.4%) 0.43 (6.7%) 0.04 (36.9%) 0.21 (8.8%)
  1. The filter values PASS, Het, LowQualHom and LowQualHet correspond to high quality homozygous, high quality heterozygous, low quality homozygous and low quality heterozygous calls repsectively. Filter values can be used to show/hide that particular type of variant in the “Variant Calls” tracks
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