Table 1 Number of variants (millions) called per accession from WGS data (% indel calls)
From: DAWN: a resource for yielding insights into the diversity among wheat genomes
Accession | PASS | Het | LowQualHom | LowQualHet |
|---|---|---|---|---|
ACBarrie | 15.51 (4.0%) | 3.87 (2.1%) | 4.85 (6.1%) | 3.06 (2.0%) |
Alsen | 22.90 (3.9%) | 2.14 (3.9%) | 5.15 (8.2%) | 3.31 (3.3%) |
Baxter | 26.44 (4.6%) | 4.99 (2.9%) | 3.91 (8.8%) | 5.05 (2.4%) |
Chara | 21.59 (4.6%) | 4.31 (2.6%) | 3.77 (8.5%) | 7.16 (1.4%) |
Drysdale | 23.29 (4.3%) | 2.29 (3.4%) | 3.67 (10.1%) | 1.80 (3.5%) |
Excalibur | 22.48 (3.9%) | 2.75 (3.1%) | 3.69 (9.6%) | 5.52 (2.3%) |
Gladius | 23.90 (4.3%) | 2.48 (3.1%) | 3.41 (10.8%) | 2.53 (2.4%) |
H45 | 20.94 (4.2%) | 2.88 (2.9%) | 3.76 (9.4%) | 4.59 (1.6%) |
Kukri | 17.21 (3.9%) | 4.43 (4.1%) | 3.13 (8.9%) | 2.69 (3.6%) |
Pastor | 19.52 (4.2%) | 5.44 (2.8%) | 4.21 (8.0%) | 5.56 (2.2%) |
RAC875 | 29.25 (5.0%) | 3.23 (3.9%) | 2.75 (11.2%) | 2.22 (4.4%) |
Volcanii | 20.28 (4.0%) | 2.81 (3.3%) | 5.61 (7.2%) | 6.87 (2.5%) |
Westonia | 20.49 (4.5%) | 3.50 (3.7%) | 4.11 (8.6%) | 4.67 (3.2%) |
Wyalkatchem | 26.67 (5.0%) | 2.69 (3.8%) | 3.14 (9.4%) | 1.73 (3.7%) |
Xiaoyan | 15.43 (4.4%) | 6.30 (1.7%) | 3.62 (8.3%) | 11.90 (1.1%) |
Yitpi | 19.59 (4.6%) | 7.84 (1.6%) | 3.45 (9.3%) | 11.77 (1.1%) |
Chinese spring | 0.09 (26.4%) | 0.43 (6.7%) | 0.04 (36.9%) | 0.21 (8.8%) |