DAWN: a resource for yielding insights into the diversity among wheat genomes

Watson-Haigh, Nathan S.; Suchecki, Radosław; Kalashyan, Elena; Garcia, Melissa; Baumann, Ute

doi:10.1186/s12864-018-5228-2

BMC Genomics

Table 2 Location of centromeres and number of haplotype groups present in BPA accessions

From: DAWN: a resource for yielding insights into the diversity among wheat genomes

Chr	Start	End	Size	# Haplotype	Haplotype	Groups
	(Mbp)	(Mbp)	(Mbp)	groups	block break
					points (Mbp)
1A	160	260	100	2	Xia: 256.967	Group1: Xia, Yit, Exc
					Exc: 258.867	Group2: Kuk, Gla, Wyal, Wes, Bax, H45, Cha, Dry, Pas, RAC, ACB, Vol
1B	180	280	100	5		Group1: Xia
						Group2: Vol
						Group3: ACB, Exc, Als, RAC
						Group4: Kuk, Gla, Wyal, Yit, Wes
						Group5: Bax, Pas, Cha, Dry
1D	146	196	50	2		Group1: Cha, Dry, Exc, Wes, Vol
						Group2: H45, Pas, Wyal, RAC, Xia
2A	270	370	100	3		Group1: ACB, Als, Bax, Dry, Exc, H45, Pas, Kuk, Wyal
						Group2: Cha, RAC, Yit, Gla, Wes, Vol
						Group3: Xia
2B	270	385	115	7	Yit: 379.837	Group1: Bax
						Group2: ACB
						Group3: Xia
						Group4: Wes, Cha, Als
						Group5: RAC, Yit, Gla, Exc
						Group6: Pas, H45, Dry
						Group7: Vol, Wyal, Kuk
2D	220	300	80	3		Group1: Yit, Xia, Als, H45
						Group2: Kuk, Cha, Dry, Pas, RAC, Gla, Exc
						Group3: Bax, Wes, Wyal
3A	240	370	130	4		Group1: Yit, Kuk, Xia, Dry
						Group2: Cha, H45, Bax, Wes, Wyal
						Group3: Gla, RAC
						Group4: Vol, Exc
3B	280	390	110	1		All
3D	200	280	80	2	Bax: 276.588	Group1: Yit, Wes, Bax, Als, Cha, Wyal, Exc
						Group2: Dry, Gla, RAC
4A	245	360	115	3		Group1: Pas, Wes, Yit, H45, Bax
						Group2: Als, Cha, Dry, Wyal, Exc
						Group3: RAC, Gla
4B	270	375	105	6		Group1: ACB
						Group2: RAC, Dry, Kuk, Exc, Wyal
						Group3: Bax, H45, Xia
						Group4: Wes, Gla, Cha
						Group5: Als
						Group6: Yit
4D	194	226	32	4		Group1: RAC, Dry
						Group2: Xia, H45
						Group3: Wyal, Bax
						Group4: Cha, Vol
5A	185	310	125	4		Group1: Als
						Group2: Vol
						Group3: Wyal, Gla, Bax, Dry
						Group4: Yit, Cha, H45, Xia
5B	145	240	95	3		Group1: RAC, Cha, Exc, H45, Dry, Als
						Group2: Wes, Bax, Wyal
						Group3: Yit, Gla
5D	145	245	100	2	RAC: 244.646	Group1: RAC, Gla, H45, Dry, Wes
					Gla: 244.646	Group2: Exc, Wyal
6A	240	355	115	3		Group1: Bax, Cha, H45, Wyal, Wes, Xia
						Group2: Kuk, Als, Dry, Pas, ACB, Yit
						Group3: RAC, Exc, Gla, Vol
6B	270	360	90	2	Exc: 345.417	Group1: Kuk, Xia, Exc, Dry, Wes, Yit
						Group2: Bax, Vol, Als, H45, Pas, Cha, Wyal, RAC, Gla
6D	184	230	46	3		Group1: Vol, Als, Dry, H45
						Group2: Cha, Kuk, Wes, Wyal
						Group3: RAC, Yit, Gla
7A	300	410	110	3		Group1: Vol, ACB, Pas, Wes
						Group2: Exc, Kuk, Bax, Cha, Dry, H45, Xia
						Group3: Wyal, RAC, Yit, Gla
7B	250	315	65	5		Group1: Vol
						Group2: Kuk, Als
						Group3: Yit, Wyal, Exc, Gla, RAC, Wes
						Group4: Dry, H45, Pas, Xia
						Group5: Bax, Cha
7D	300	385	85	4		Group1: Kuk, Xia, Wyal
						Group2: RAC, Exc, Gla
						Group3: Yit, H45, Als, Wes
						Group4: Dry, Bax, Cha (Pas)

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