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Table 7 Comparison of fold expression of selected transcripts between RNA-Seq and qRT PCR experiments. The P values for the RNA-Seq data is provided in parentheses, and the statistical significance of the qRT PCR data is indicated by superscripted letters (a,b)

From: A transcriptomic snapshot of early molecular communication between Pasteuria penetrans and Meloidogyne incognita

S. No. Transcript ID Annotation Fold Change
RNA-Seq qRT PCR
1. TR11426 Heat shock protein 20 −4.18 (P = 0.02) −1.24
2. TR14120 Phospholipase A2 −2.78 (P = 0.01) −7.98b
3. TR16177 Aspartic protease −3.93 (P = 0.00) −2.52b
4. TR10194 Bm 3887 −2.10 (P = 0.05) −3.20b
5. TR10010 Fructose bis phosphate aldolase −3.60 (P = 0.00) −7.63b
6. TR31579 Selenium binding protein 2.01 (P = 0.00) 6.89b
7. TR14793 Glucosyl transferase 2.34 (P = 0.04) 4.89b
8. TR23171 Venom allergen-like protein 2.68 (P = 0.02) 1.73a
9. TR35213 Glycoside hydrolase −3.89 (P = 0.00) −4.16b
10. TR40461 Glutathione S-transferase 2.13 (P = 0.00) 0.51
11. TR11544 Fatty acid and retinol binding protein −5.06 (P = 0.00) −6.09b
12. TR26363 Major sperm protein 3.46 (P = 0.00) 2.92b
13. TR10990 Ubiquitin − 4.82 (P = 0.00) −5.04b
14. TR20164 Tropomyosin −3.32 (P = 0.00) −0.35
15. TR24005 Serine protease −3.96 (P = 0.00) −2.71b
  1. asignificant and bhighly significant as compared to control. Data was considered statistically significant at P value ≤0.05 for both the experiments