Fig. 4
From: Accuracy of RNAseq based SNP discovery and genotyping in Populusnigra
Positions of SNPs discovered and genotyped with RNAseq across 12 Populus nigra individuals and along four genes. a. “HCT1” (Potri.003G183900); b. “CCR7” (Potri.003G181400); c. “4CL3” (Potri.001G036900); d. “CAD4” (Potri.009G095800). “Coverage” in red refers to the mean depth at each position among the 12 individuals; “Frag. Marroni” and “SNP Marroni” in blue refer to sequenced fragments and SNPs discovered and typed in [3, 4]; “SNP RNA-seq” in green refers to SNPs discovered and typed in the present study with the modality “3CallersConsensus-noNA”. Point symbol size for each SNP is proportional to its MAF across the 12 individuals