Skip to main content

Table 5 Presence and number of motif copies in N. benthamiana MIRNA promoters

From: Identification and characterisation of microRNAs and their target genes in phosphate-starved Nicotiana benthamiana by small RNA deep sequencing and 5’RACE analysis

Motifs miR6147 miR399–1 miR399–2 miR399–3 miR399–4 miR399–5 miR827 miR2111–1
TATA YES YES YES YES YES YES YES YES
P1BS 2 1 3 3 2 3 4 1
GATA-Box 5 > 10 > 10 > 10 > 10 > 10 > 10 > 10
W-box 4 6 > 10 10 > 10 8 10 > 10
LTRE NDa 2 ND 3 4 5 2 3
DRE/C-repeat ND 1 1 1 ND 5 ND 1
  1. aND: Not detected