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Table 2 Phase by phase analysis of the correlation between the degradation rate constant k and the mRNA concentration for the rph-1 control strain and the rph-1 Δrnr and rph-1 Δpnp double mutants. Number of genes, correlation coefficients and the associated p-value are given in the three zones defined in Fig. 3 for the rph-1 control strain and the rph-1 Δrnr and rph-1 Δpnp double mutants

From: PNPase is involved in the coordination of mRNA degradation and expression in stationary phase cells of Escherichia coli

 

Data

PHASE I

PHASE II

PHASE III

rph-1 control

Number of genes

1889

834

476

Correlation coefficient

−0.80

−0.60

0.27

p-value

4.14E-108

1.07E-16

9.87E-09

rph-1 Δrnr double mutant

Number of genes

1957

750

369

Correlation coefficient

−0.80

−0.69

0.04

p-value

9.66E-107

1.88E-23

4.23E-01

rph-1 Δpnp double mutant

Number of genes

1150

1747

1144

Correlation coefficient

−0.83

−0.70

0.28

p-value

8.75E-121

1.03E-23

3.29E-09