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Table 1 Summary of RNA sequencing and mapping results. Number of raw and trimmed Illumina reads used in the experiments and number of reads matching the de novo Quercus ilex leaf transcriptome for each library

From: How Quercus ilex L. saplings face combined salt and ozone stress: a transcriptome analysis

Library nr. (and treatment) Number of raw reads Number of reads after trimming Number of mapped reads on de-novo transcriptome % of mapped reads on de-novo transcriptome
1 (C) 29,780,158 28,507,766 23,116,305 81.09%
2 (C) 34,707,140 33,397,650 27,251,484 81.60%
3 (C) 30,142,604 28,938,768 23,290,009 80.48%
4 (C) 31,504,924 30,332,808 24,980,007 82.35%
5 (S) 27,286,188 25,418,352 20,578,777 80.96%
6 (S) 28,946,286 27,599,316 22,254,839 80.64%
7 (S) 24,962,794 23,641,096 18,818,381 79.60%
8 (S) 28,231,268 27,499,364 21,995,959 79.99%
9 (O3) 27,653,576 26,359,594 21,539,430 81.71%
10 (O3) 38,657,480 37,427,844 30,572,382 81.68%
11 (O3) 58,745,972 57,078,984 46,381,516 81.26%
12 (O3) 35,218,784 34,468,334 28,082,724 81.47%
13 (S + O3) 57,199,362 54,995,868 44,442,489 80.81%
14 (S + O3) 32,727,622 31,290,440 25,418,644 81.23%
15 (S + O3) 27,994,188 26,349,048 21,210,329 80.50%
16 (S + O3) 29,327,752 27,422,064 22,169,515 80.85%
  1. C Control plants, S Salt-treated plants, O3 Ozonated plants, S + O3 Salt plus O3 treated plants