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Table 2 Tandem gene arrays with highly variable copy numbers between L. donovani CL-SL and VL-SL isolates

From: Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

Chr

OrthoMCL ID

Product description

No of genes in ref

Haploid number CL

Haploid number VL

VL/CL ratio

27

OG5_127093

D-lactate dehydrogenase-like protein

1

4

33

7.96

27

OG5_126731

Branched-chain amino acid aminotransferase, putative

1

5

35

6.84

29

OG5_131290

Nodulin-like, putative

1

1

6

4.41

23

OG5_154577

Hypothetical protein, conserved

1

1

4

4.22

23

OG5_181194

Hypothetical protein, conserved

1

1

5

3.86

23

OG5_150800

Checkpoint protein Hus1

1

1

5

3.85

21

OG5_126575

Histone H4

1

1

2

3.80

23

OG5_127096

Tryptophanyl-trna synthetase, putative

1

1

5

3.47

23

OG5_180874

Zinc finger, C3Hc4 type (ring finger) containing protein, putative

1

1

4

3.06

23

OG5_133937

Pteridine reductase 1

1

1

4

3.02

10

OG5_126749

Major surface protease Gp63, putative

2

7

21

3.00

34

OG5_130729

Amastin-like surface protein-like protein

2

4

2

0.50

22

OG5_126823

Ribonucleoside-diphosphate reductase small chain, putative

3

2

1

0.50

12

OG5_136657

Protein of unknown function (Duf962), putative

2

2

1

0.50

8

OG5_132981

Amastin, putative

1

2

1

0.44