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Table 5 Comparison of SNP/Indel profiling against different sequences of L. donovani

From: Genomic insights into virulence mechanisms of Leishmania donovani: evidence from an atypical strain

 

SNP count

Indel count

LdBPK282A1 (Standard reference)

LdBPKPAC2016beta (PacBio sequence)

LdBPK282A1 (Standard reference)

LdBPKPAC2016beta (PacBio sequence)

Shared by both CL and VL

56,560

57,063

1674

1669

Unique to CL

21,799

24,858

2109

2140

Unique to VL

8688

7920

159

161