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Table 2 Error-correction performance comparison between ZEC, Lighter, Racer, BLESS2, Musket, BFC, SGA and MEC

From: Mining statistically-solid k-mers for accurate NGS error correction

Data Corrector Gain Reca Prec Pber(%)
R1 ZEC 0.908 0.912 0.996 0.102
  Lighter 0.839 0.845 0.994 0.163
  Racer 0.760 0.822 0.929 0.190
  BLESS2 0.189 0.409 0.650 0.879
  Musket 0.499 0.628 0.830 0.448
  SGA 0.746 0.815 0.922 0.202
  BFC 0.753 0.817 0.927 0.196
  MEC 0.909 0.911 0.998 0.102
R2 ZEC 0.584 0.663 0.894 0.537
  Lighter 0.226 0.329 0.762 1.076
  Racer 0.364 0.450 0.839 0.780
  BLESS2 0.318 0.405 0.806 0.890
  Musket 0.265 0.364 0.786 0.984
  SGA 0.331 0.423 0.822 0.843
  BFC 0.306 0.400 0.811 0.893
  MEC 0.570 0.631 0.912 0.541
R3 ZEC 0.802 0.923 0.884 0.087
  Lighter 0.445 0.764 0.706 0.256
  Racer 0.562 0.814 0.764 0.196
  BLESS2 0.130 0.641 0.556 0.438
  Musket 0.533 0.802 0.749 0.211
  SGA 0.567 0.818 0.765 0.194
  BFC 0.603 0.833 0.783 0.176
  MEC 0.788 0.852 0.930 0.117
R4 ZEC 0.746 0.833 0.905 0.137
  Lighter 0.126 0.408 0.591 0.688
  Racer 0.313 0.541 0.703 0.484
  BLESS2 -0.517 0.018 0.003 0.862
  Musket 0.502 0.660 0.807 0.320
  SGA 0.542 0.690 0.823 0.289
  BFC 0.195 0.457 0.636 0.607
  MEC 0.705 0.806 0.889 0.201
S1 ZEC 0.918 0.935 0.982 0.056
  Lighter 0.791 0.851 0.934 0.130
  Racer 0.882 0.916 0.964 0.071
  BLESS2 0.634 0.740 0.875 0.243
  Musket 0.819 0.871 0.944 0.111
  SGA 0.810 0.865 0.940 0.117
  BFC 0.866 0.903 0.961 0.081
  MEC 0.899 0.916 0.982 0.063
S2 ZEC 0.853 0.894 0.956 0.109
  Lighter 0.058 0.329 0.548 0.891
  Racer 0.168 0.408 0.630 0.720
  BLESS2 0.311 0.509 0.719 0.543
  Musket 0.232 0.453 0.672 0.636
  SGA 0.075 0.342 0.562 0.862
  BFC 0.751 0.822 0.920 0.157
  MEC 0.849 0.887 0.959 0.122
  1. The numbers in bold face are the best gain achieved for each data set