Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data

Table 3 TF pairs with cell line specificity

	TF combinations	R _G	R _K	I _RV
1	ATF3:CEBPB	0.028	0.281	−0.821
2	ATF3:JUND	0.002	0.449	−0.991
3	ATF3:P300	0.032	0.358	−0.838
4	BCL3:P300	0.366	0.071	0.676
5	CMYC:JUND	0.007	0.251	−0.945
6	EGR1:JUND	0.024	0.300	−0.849
7	ELF1:JUND	0.015	0.341	−0.918
8	ETS1:JUND	0.013	0.263	−0.907
9	GABPA:JUND	0.002	0.311	−0.986
10	JUND:MAX	0.027	0.465	−0.891
11	JUND:MAZ	0.041	0.488	−0.844
12	JUND:NRSF	0.013	0.254	−0.903
13	JUND:POL2	0.016	0.347	−0.914
14	JUND:TAF1	0.031	0.315	−0.823
15	JUND:ZNF143	0.005	0.291	−0.968
16	JUND:ZNF384	0.039	0.346	−0.798
17	PML:USF1	0.280	0.000	1.000

ISSN: 1471-2164