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Table 5 The prediction accuracies of gene expression level for 66 factors in two cell lines (Acc values)

From: Revealing transcription factor and histone modification co-localization and dynamics across cell lines by integrating ChIP-seq and RNA-seq data

TF/HM GM12878(%) K562(%) TF/HM GM12878(%) K562(%) TF/HM GM12878(%) K562(%)
H3k9ac 89.18 90.75 PU.1 71.52 70.87 STAT5 60.15 60.21
ELF1 88.05 86.77 TBLR1 70.45 63.27 RAD21 59.98 58.56
TAF1 87.67 90.18 GABPA 70.01 77.88 H3k27me3 59.61 62.45
POL2 86.65 91.77 NRF1 69.46 65.09 NRSF 59.00 63.88
H3k27ac 85.96 91.69 NFYB 69.07 63.04 H4k20me1 58.16 62.35
MXIL 85.31 68.23 SRF 68.08 61.18 CREB1 57.97 64.88
YY1 84.03 82.17 CHD1 68.02 76.89 SMC3 57.91 55.25
MAZ 83.99 87.94 ELK1 66.72 59.98 CFOS 57.43 61.66
PML 83.21 81.25 USF1 66.62 69.46 CEBPB 56.82 68.67
EGR1 82.21 84.14 USF2 66.43 56.13 H3k9me3 56.32 60.93
H2az 82.17 81.88 ZNF143 65.97 68.48 ZBTB33 56.09 57.30
CHD2 79.97 70.11 H3k36me3 65.22 72.23 NFYA 55.90 60.00
TBP 79.89 88.89 MEF2A 64.92 56.43 STAT1 54.96 52.43
SP1 79.80 68.31 P300 64.80 72.58 ATF3 54.58 72.60
ZNF384 79.70 87.00 SIX5 64.78 62.24 Corest 53.35 57.81
MAX 79.57 88.32 CMYC 64.02 76.87 EZH2 52.80 51.26
H3k4me2 77.86 86.29 ETS1 62.93 78.42 NFE2 52.20 52.64
H3k4me3 77.15 88.09 BCLAF1 62.91 61.74 TR4 52.09 52.16
CDP 76.52 83.09 E2F4 62.20 78.21 JUND 51.84 79.78
H3k79me2 75.45 78.82 BCL3 61.55 52.49 MAFK 50.86 59.21
H3k4me1 73.04 82.71 CTCF 61.47 60.36 POL3 50.19 50.15
BHLHE40 71.95 77.21 RFX5 61.09 54.12 ZNF274 50.04 50.06