Table 2 Top twenty differentially expressed genes (DEGs) that were oppositely regulated by salt stress in IR29 and Pok

Os01g24560.1

down (− 2.44)

no

no

up (2.86)

fruit bromelain precursor

Os02g03900.1

down (−3.45)

no

no

up (1.92)

metal transporter Nramp6

Os01g54910.1

down (−9.57)

no

up (9.24)

no

GTP-binding protein typA/bipA

Os02g40730.1

down (−2.15)

no

no

up (2.98)

ammonium transporter protein

Os10g39980.1

down (−2.43)

no

no

up (1.86)

expressed protein

Os05g02390.1

down (−2.37)

no

no

up (2.81)

ZOS5–02 - C2H2 zinc finger protein

Os11g24140.1

down (−2.20)

no

no

up (2.51)

plastocyanin-like domain containing protein

Os03g19420.2

down (−5.03)

no

down (−4.58)

up (4.25)

nicotianamine synthase

Os03g19427.1

down (−5.62)

no

down (−5.36)

up (3.95)

nicotianamine synthase

Os10g31670.1

down (−2.75)

down (−4.57)

no

up (5.21)

retrotransposon protein, putative, unclassified

Os02g38920.1

no

down (−9.92)

no

up (2.40)

glyceraldehyde-3-phosphate dehydrogenase

Os06g04460.1

no

down (−10.17)

up (10.19)

down (− 10.49)

hypersensitive-induced response protein

Os01g63410.1

no

up (2.52)

no

down (−10.83)

expressed protein

Os06g29120.2

no

up (2.41)

down (−1.99)

no

STE_PAK_Ste20_STLK.5 - STE kinases

Os07g34589.3

no

up (2.58)

down (−12.11)

no

translation initiation factor SUI1

Os08g37790.1

no

up (11.81)

no

down (−11.72)

phospho-2-dehydro-3-deoxyheptonate aldolase

Os01g42650.1

up (11.12)

no

no

down (−12.03)

cytochrome c oxidase subunit 5B

Os02g52860.1

up (2.24)

no

down (−2.21)

no

phosphate carrier protein, mitochondrial precursor

Os03g16950.1

up (2.47)

up (3.38)

down (−1.88)

no

cysteine-rich repeat secretory protein 55 precursor

Os05g43570.1

up (9.77)

up (10.37)

down (−9.57)

down (−9.85)

AGC_AGC_other_NDRh_TRCd.2 - ACG kinases