Genotype- and tissue-specific miRNA profiles and their targets in three alfalfa (Medicago sativa L) genotypes

BMC Genomics

Table 4 Mapping of the reads obtained from the degradome libraries

Database	Altet-4		NECS-141		NF08ALF06
Database	Total reads	Unique reads	Total reads	Unique reads	Total reads	Unique reads
M. truncatula genome	852,790	487,582	1,541,055	791,294	3,091,832	1,021230
M. sativa genome	1,488,681	957,866	2,691,763	1,435,659	4,591,130	1,877,041
Cds	770,970	426,278	1,436,059	727,330	2,928,098	933,425
ncRNA	231,076	22,907	186,813	18,014	1,305,681	36,585
Repeats	171,358	16,804	116,741	16,759	636,675	23,958
Pre-miRBase	34,631	837	35,979	1045	50,136	1192
Total	28,674,678	2,286,693	30,573,270	3,137,327	30,812,606	3,885,547

ISSN: 1471-2164