Fig. 3
From: Comparative transcriptomics between high and low rubber producing Taraxacum kok-saghyz R. plants
Expression of contigs involved in terpenoid biosynthesis in HR compared to LR and Y11 plants. On the top left corner, a schematic model of the rubber biosynthetic machinery. Relative levels of expression are showed by a color gradient from low (green) to high (red). Asterisks indicate significant differences (P < 0.05). Black dots sizes are proportional to the number of reads. Abbreviations: ACAT (Acetyl-CoA acetyltransferase), HMGCS (Hydroxymethylglutaryl-CoA synthase), HMGCR (Hydroxymethylglutaryl-CoA reductase), MVLK (Mevalonate kinase), PMVK (Phosphomevalonate kinase), DPMDC (Diphosphomevalonate decarboxylase), IPP (Isopentenyl pyrophosphate), IDI (Isopentenyl-diphosphate delta-isomerase), DMAPP (Dimethylallyl-diphosphate), GPP (Geranyl diphosphate), GPPS (Geranyl-diphosphate synthase), FPP (Farnesyl diphosphate), FPPS (Farnesyl diphosphate synthase), GGPP (Geranylgeranyl diphosphate), GGPPS (Geranylgeranyl diphosphate synthase), CPT (Cis-prenyl transferase), REF (Rubber elongation factor), SRPP (Small Rubber particle protein), GGR (Geranylgeranyl reductase), TAT (Tyrosine aminotransferase), PDS (4-hydroxyphenylpyruvate dioxygenase), HGGT (Homogentisate geranylgeranyltransferase), TC (Tocopherol cyclase), TMT (Tocopherol O-methyltransferase), MPBQ/MSBQ MT (2-methyl-6-phytyl-1,4-benzoquinone/2-methyl-6-solanyl-1,4-benzoquinone methyltransferase), HGD (Homogentisate 1,2-dioxygenase), COQ2 (4-hydroxybenzoate polyprenyltransferase), G10H (Geraniol 10-hydroxylase), SLS (Secologanin synthase), SS (Strictosidine synthase), IGPS (Indole-3-glycerol phosphate synthase), ALG1 (Asparagine-linked glycosylation protein 1), ALG5 (Asparagine-linked glycosylation protein 5), ALG8 (Asparagine-linked glycosylation protein 8), ALG10 (Asparagine-linked glycosylation protein 10), STT (Dolichyldiphosphooligosaccharide-protein glycosyltransferase), LPPG (Lipid phosphate phosphatase gamma), MOGS (Mannosyl-oligosaccharide glucosidase), MNS (Mannosyl-oligosaccharide 1,2-alpha-mannosidase), MGAT (Alpha-1,3-mannosyl-glycoprotein 2-beta-M-acetylglucosaminyltransferase), SQS (Squalene synthase), SQE (Squalene epoxidase), BAS (Beta-amirin synthase), OSC (Oxidosqualene cyclase), CAS (Cycloartenol synthase), SMO (C-4 Methyl sterol oxidase), STE (Delta(7)-sterol-C5-desaturase), FK (Delta(14)-sterol reductase, HSDL (Hydroxysteroid dehydrogenase-like), GAS (Germacrene A synthase), GAO (Germacrene A oxydase), CS (Costunolide synthase), PS (Parthenolide synthase)