Table 3 Comparison of breakpoint prediction for the NA12878 dataset for iMGEins, Tangram, Tea, TEMP, RetroSeq and MELT
From: iMGEins: detecting novel mobile genetic elements inserted in individual genomes
Proximity around breakpointsa | iMGEins | Tangram | Tea | TEMP | RetroSeq | MELT |
|---|---|---|---|---|---|---|
Breakpoints ±100 | 400 | 433 | 397 | 394 | 426 | 439 |
Breakpoints ±20 | 397 | 421 | 393 | 394 | 305 | 421 |
Breakpoints ±10 | 366 | 297 | 348 | 363 | 180 | 93 |