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Table 4 Marker distribution and chromosome parameters on the enriched genetic map of the Yumian 1 × CA3084 RIL population

From: A high density SLAF-SNP genetic map and QTL detection for fibre quality traits in Gossypium hirsutum

Chr Loci Genetic Distance (cM) Average
interval
largest gap
(cM)
No. gaps
(> 10 cM)
Physical
Length
(Mb)
Genome
Coverage
(%) a
SDMs SDMs
(%)
SDRs
Chr01 141 120.5 0.9 6.6 0 99.3 99.4 38 27.0 2
Chr02 63 108.1 1.7 11.6 1 79.4 95.2 7 11.1 1
Chr03 201 115.9 0.6 8.9 0 95.7 95.5 16 8.0 1
Chr04 94 96.2 1.0 6.9 0 61.6 98.0 19 20.2 3
Chr05 241 128.2 0.5 12.4 1 89.5 97.3 3 1.2 0
Chr06 86 94.1 1.1 7.0 0 100.6 97.5 0 0.0 0
Chr07 465 140.7 0.3 5.8 0 72.3 92.4 11 2.4 1
Chr08 958 206.4 0.2 14.4 2 91.3 88.1 506 52.8 11
Chr09 269 116.4 0.4 12.4 1 73.0 97.4 18 6.7 1
Chr10 274 117.6 0.4 5.1 0 99.3 98.4 49 17.9 2
Chr11 230 131.7 0.6 7.1 0 90.5 97.0 62 27.0 3
Chr12 176 117.8 0.7 10.0 0 86.2 98.6 6 3.4 1
Chr13 232 124.8 0.5 6.9 0 76.4 95.6 33 14.2 2
A t 3430 1618.4 0.5 114.9 5 1115.2 96.2 768 22.4 28
Chr14 152 135.3 0.9 5.8 0 66.8 99.2 28 18.4 3
Chr15 190 114.3 0.6 9.0 0 60.3 98.1 26 13.7 2
Chr16 128 104.7 0.8 8.1 0 52.7 95.2 11 8.6 1
Chr17 154 107.3 0.7 8.3 0 46.0 98.6 12 7.8 1
Chr18 238 123.2 0.5 8.1 0 60.4 99.7 101 42.4 3
Chr19 125 107.2 0.9 8.0 0 60.2 97.3 45 36.0 2
Chr20 254 120.2 0.5 5.1 0 60.1 94.8 32 12.6 2
Chr21 272 132.2 0.5 4.4 0 62.9 95.2 126 46.3 3
Chr22 290 130.0 0.5 8.0 0 46.2 89.7 160 55.2 3
Chr23 195 116.2 0.6 7.4 0 49.7 97.4 60 30.8 2
Chr24 365 84.4 0.2 3.6 0 61.7 93.6 46 12.6 2
Chr25 290 131.6 0.5 14.4 1 63.2 98.4 62 21.4 2
Chr26 171 116.8 0.7 12.4 2 58.0 98.1 84 49.1 3
D t 2824 1523.3 0.5 102.5 3 748.0 96.6 793 28.1 29
Total 6254 3141.7 0.5 217.4 8 1863.2 96.4 1561 25.0 57
  1. Chr chromosome, SDM Segregation distorted Marker, SDR segregation distorted region
  2. aPercentage of pseudomolecules assembled by Zhang et al [13] spanned by the genetic map of the indicated chromosome
  3. The boldfaced entries represent the subtotal for each subgenome of Gossypium hirsutum