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Table 5 Stable quantitative trait loci (QTL) for fiber quality and yield component traits identified in the Yumian 1 × CA3084 RIL population

From: A high density SLAF-SNP genetic map and QTL detection for fibre quality traits in Gossypium hirsutum

Traita QTL Name Chr Position Nearest Marker LOD Additiveb PVEc(%)
FE qFE06.1 6 32.50 Marker3668 4.2 0.03 11.6
qFE09.1 9 101.35 Marker11220 3.0 -0.04 8.2
qFE10.1 10 111.37 Marker12629 3.5 -0.05 9.7
qFE11.1 11 39.91 Marker12871 3.4 -0.03 9.4
qFE12.1 12 96.25 Marker13988 2.9 -0.03 8.2
qFE16.1 16 63.41 Marker18806 3.0 0.03 8.3
qFE21.1 21 46.14 Marker21777 4.8 0.03 12.0
qFE25.1 25 23.43 Marker17812 10.6 -0.04 24.6
FL qFL06.1 6 35.14 Marker3681 4.0 0.45 11.1
qFL07.1 7 114.88 Marker5300 6.0 0.66 15.9
qFL09.1 9 75.59 Marker10900 2.3 -0.34 6.4
qFL10.1 10 117.62 Marker12647 8.9 -0.81 22.7
qFL11.1 11 70.19 Marker13126 3.5 -0.52 9.6
qFL22.1 22 1.27 Marker16370 3.6 0.45 9.2
qFL25.1 25 28.17 Marker17818 3.6 -0.44 9.3
qFL16.1 16 63.41 Marker18806 2.4 0.34 6.6
qFL23.1 23 63.19 Marker20657 3.8 -0.43 10.5
qFL21.1 21 46.14 Marker21777 6.9 0.58 18.1
qFL18.1 18 38.51 Marker23253 3.1 -0.39 8.5
qFL18.2 18 95.30 Marker23590 2.8 -0.38 7.9
FM qFM03.2 3 109.14 Marker2016 4.5 0.14 12.1
qFM05.1 5 49.48 Marker2858 4.4 -0.14 11.9
qFM05.2 5 91.28 Marker3260 3.3 0.11 8.5
qFM07.1 7 135.94 Marker5551 6.7 -0.17 17.4
qFM09.2 9 90.05 Marker11038 2.7 -0.09 7.6
qFM11.1 11 30.44 Marker12834 2.8 0.09 7.9
qFM12.1 12 25.00 Marker13539 4.0 0.11 11.0
qFM13.1 13 83.48 Marker14712 4.9 -0.15 13.2
qFM14.1 14 75.35 Marker15592 2.9 0.09 8.0
qFM16.1 16 19.95 Marker18674 3.2 -0.12 8.7
qFM20.1 20 100.87 Marker21457 3.4 0.13 9.5
qFM21.1 21 0.00 Marker21572 4.7 -0.14 11.9
qFM26.1 26 42.25 Marker22639 2.9 0.11 7.6
FS qFS03.1 3 31.80 Marker1430 3.3 0.71 9.2
qFS06.1 6 32.50 Marker3668 6.8 1.43 17.7
qFS07.1 7 114.88 Marker5313 2.3 0.60 6.6
qFS09.1 9 100.18 Marker11170 2.8 -0.94 7.7
qFS10.1 10 117.62 Marker12647 5.2 -1.29 13.8
qFS12.2 12 94.84 Marker13975 4.3 -0.82 11.9
qFS16.2 16 63.41 Marker18806 2.5 0.62 7.0
qFS18.1 18 38.51 Marker23253 2.8 -0.03 7.9
qFS20.1 20 105.10 Marker21486 2.8 -0.93 7.7
qFS21.1 21 46.14 Marker21777 2.9 0.68 8.2
qFS22.1 22 1.27 Marker16370 5.5 0.81 13.6
FU qFU02.1 2 52.21 Marker1050 2.3 0.28 6.5
qFU03.1 3 65.07 Marker1691 3.2 0.32 8.9
qFU05.1 5 74.29 Marker3008 5.1 -0.55 12.7
qFU06.1 6 47.65 Marker3816 4.2 0.36 11.5
qFU07.1 7 45.57 Marker4422 3.3 0.32 9.2
qFU12.1 12 35.14 Marker13621 3.2 0.32 8.9
qFU13.1 13 0.69 Marker14041 6.4 -0.63 15.7
qFU17.1 17 78.97 Marker16299 2.2 0.27 6.3
qFU25.1 25 2.21 Marker17695 5.1 -0.44 13.7
qFU23.1 23 22.04 Marker20444 3.5 0.33 9.7
qFU21.1 21 62.65 Marker21898 2.5 -0.28 6.9
  1. aFL: fiber length, FU: fiber uniformity, FS: fiber strength, FE: fiber elongation, FM: fiber micronaire. b Positive additive effects indicated that Yumian 1 alleles increased the phenotypic value, negative additive effects suggested that CA3084 alleles increased the phenotypic value. c phenotypic variance explained.