Target | qPCR – 2-ΔΔCt | RNA-seq | |||
---|---|---|---|---|---|
FCa | P-value | FCa | FDRb | P-value | |
Mammary parenchyma | |||||
 ABCC11 | −11.65 | 0.0259 | −3.67 | 0.047 | 0.00410 |
 ADAM12 | 2.56 | 0.0072 | 3.40 | 0.026 | 0.00010 |
 ASPHD1 | 4.87 | 0.0473 | 3.60 | 0.046 | 0.00402 |
 LOC100335879 | 4.95 | 0.0075 | 3.74 | 0.046 | 0.00395 |
 MPZ | −9.71 | 0.0202 | −3.80 | 0.029 | 0.00045 |
 PLN | −17.14 | 0.0319 | −3.93 | 0.037 | 0.00173 |
 SCN7A | −13.56 | 0.0186 | −3.37 | 0.038 | 0.00203 |
 SEZ6L | 8.14 | 0.0256 | 4.26 | 0.038 | 0.00195 |
Mammary fat pad | |||||
 CAV3 | −2.64 | 0.0019 | − 2.20 | 0.012 | 0.00009 |
 ELN | 6.26 | 0.0001 | 2.50 | 0.01 | 0.00003 |
 FCGR2A | 8.71 | 0.0007 | 2.70 | 0.007 | 0.00001 |
 LOC781726 | 7.46 | 0.0970 | 3.72 | 0.019 | 0.00044 |
 PLIN4 | 6.37 | <.0001 | 2.46 | 0.012 | 0.00012 |
 PLPPR4 | −3.95 | 0.0345 | −2.38 | 0.035 | 0.00165 |
 RPRML | −2.16 | 0.0042 | −2.51 | 0.042 | 0.00237 |
 WDR66 | −6.97 | 0.0015 | −2.60 | 0.012 | 0.00009 |