Table 1 Summary of sequencing quality
Sample ID | Raw reads | Clean reads | Clean bases | Error (%) | Q20 (%) | Q30 (%) | GC (%) |
|---|---|---|---|---|---|---|---|
Dh_R1 | 94,007,182 | 92,489,906 | 13.68Gb | 0.0125 | 98.18 | 94.79 | 46.65 |
Dh_R2 | 70,688,878 | 69,374,122 | 10.22Gb | 0.0131 | 97.93 | 94.09 | 51.27 |
Dh_R3 | 85,816,370 | 84,494,594 | 12.5Gb | 0.0125 | 98.21 | 94.83 | 47.07 |
Dh_S1 | 62,673,824 | 59,985,308 | 8.78Gb | 0.0145 | 97.34 | 92.55 | 46.52 |
Dh_S2 | 107,507,880 | 105,797,304 | 15.74Gb | 0.0116 | 98.63 | 95.78 | 46.34 |
Dh_S3 | 71,777,838 | 68,278,618 | 9.97Gb | 0.0148 | 97.19 | 92.26 | 46.15 |
Dh_L1 | 79,875,854 | 76,612,106 | 11.22Gb | 0.0145 | 97.39 | 92.65 | 46.5 |
Dh_L2 | 73,382,858 | 70,025,838 | 10.23Gb | 0.0148 | 97.25 | 92.33 | 47.05 |
Dh_L3 | 91,173,392 | 89,576,210 | 13.24Gb | 0.0126 | 98.13 | 94.64 | 46.81 |
Total | 736,904,076 | 716,634,006 | 105.58Gb |