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Table 1 F. prausnitzii strains used in the study

From: Comparative analysis of Faecalibacterium prausnitzii genomes shows a high level of genome plasticity and warrants separation into new species-level taxa

Strain name

Coverage, X

Isolation source

Genbank accession

Contigs, N

Length, Mb

G + C, mol%

Reference

APC942/8–14-2

860

Faeces of 34 y.o. male

PRKZ00000000

28

2.69

57

Current study

APC942/18–1

285

Faeces of 34 y.o. male

PRLA00000000

26

2.80

57.3

Current study

APC942/30–2a

722

Faeces of 34 y.o. male

CP026548.1

1

2.83

57.2

Current study

APC942/32–1

738

Faeces of 34 y.o. male

PRLB00000000

52

2.99

57.4

Current study

APC922/41–1

726

Faeces of 30 y.o. male

PRLC00000000

54

2.79

57.7

Current study

APC923/51–1

783

Faeces of 30 y.o. male

PRLD00000000

70

3.03

56.2

Current study

APC923/61–1

240

Faeces of 55 y.o. male

PRLE00000000

19

2.68

57.4

Current study

APC918/95b

349

Faeces of 25 y.o. female

NZ_CP030777.1

1

2.97

56.4

Current study

APC924/119

290

Faeces of 44 y.o. female

PRLF00000000

83

3.02

56.4

Current study

ATCC 27766

950

human faeces

PXUQ00000000

83

3.02

56.5

[1]

ATCC 27768T

300

human faeces

PXUP00000000

76

3.03

56.4

[1]

CNCM 4540

1369

human faeces

NZ_NMTQ00000000.1

48

3.04

55.7

[34]

CNCM 4541

1403

human faeces

NZ_NMTR00000000.1

78

2.82

58.1

[34]

CNCM 4542

1401

human faeces

NZ_NMTS00000000.2

106

2.91

55.8

[34]

CNCM 4543

1645

human faeces

NZ_NMTT00000000.2

22

3.08

56.2

[34]

CNCM 4544

1627

human faeces

NZ_NMTU00000000.1

69

2.80

56.0

[34]

CNCM 4546

2019

human faeces

NZ_NMTV00000000.1

244

3.42

54.9

[34]

CNCM 4573

1319

human faeces

NZ_NMTW00000000.1

83

3.28

55.9

[34]

CNCM 4574

1821

human faeces

NZ_NMTX00000000.1

38

3.09

56.3

[34]

CNCM 4575

1798

human faeces

NZ_NMTY00000000.1

37

3.01

57.5

[34]

CNCM 4644

1298

human faeces

NZ_NMTZ00000000.1

36

2.92

56.4

[34]

SL3/3

20

Faeces of 46 y.o. female

FP929046.1

1

3.21

55.7

[31]

L2–6

29

Faeces of 2 y.o. male

FP929045.1

1

3.32

56.8

[3]

M21/2

8.4

Faeces of 36 y.o. female

NZ_ABED00000000.2

29

3.13

56.2

[31]

A2–165

395

Faeces of 34 y.o. female

NZ_CP022479.1

1

3.11

56.3

[3]

KLE1255

65

N/A

NZ_AECU00000000.1

249

2.93

56.3

Weinstock et al. 2010b

2789STDY5608869

N/A

human faeces

NZ_CYYL00000000.1

49

2.85

57.7

[73]

2789STDY5834970

N/A

human faeces

NZ_CYXN00000000.1

86

3.05

56.0

[73]

Indica

500

human faeces

NZ_CP023819.1

1

2.87

56.9

[56]

AHMP_21

203

human faeces

NZ_NOUV00000000.1

85

3.02

57.4

[34]

HMI_19

331

human faeces

NZ_NOUW00000000.1

63

2.88

63

[34]

  1. aStrains with completed circular genomes are highlighted in bold
  2. bDirect data submission to NCBI Genbank
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BMC Genomics

ISSN: 1471-2164

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