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Table 1 F. prausnitzii strains used in the study

From: Comparative analysis of Faecalibacterium prausnitzii genomes shows a high level of genome plasticity and warrants separation into new species-level taxa

Strain name Coverage, X Isolation source Genbank accession Contigs, N Length, Mb G + C, mol% Reference
APC942/8–14-2 860 Faeces of 34 y.o. male PRKZ00000000 28 2.69 57 Current study
APC942/18–1 285 Faeces of 34 y.o. male PRLA00000000 26 2.80 57.3 Current study
APC942/30–2 a 722 Faeces of 34 y.o. male CP026548.1 1 2.83 57.2 Current study
APC942/32–1 738 Faeces of 34 y.o. male PRLB00000000 52 2.99 57.4 Current study
APC922/41–1 726 Faeces of 30 y.o. male PRLC00000000 54 2.79 57.7 Current study
APC923/51–1 783 Faeces of 30 y.o. male PRLD00000000 70 3.03 56.2 Current study
APC923/61–1 240 Faeces of 55 y.o. male PRLE00000000 19 2.68 57.4 Current study
APC918/95b 349 Faeces of 25 y.o. female NZ_CP030777.1 1 2.97 56.4 Current study
APC924/119 290 Faeces of 44 y.o. female PRLF00000000 83 3.02 56.4 Current study
ATCC 27766 950 human faeces PXUQ00000000 83 3.02 56.5 [1]
ATCC 27768T 300 human faeces PXUP00000000 76 3.03 56.4 [1]
CNCM 4540 1369 human faeces NZ_NMTQ00000000.1 48 3.04 55.7 [34]
CNCM 4541 1403 human faeces NZ_NMTR00000000.1 78 2.82 58.1 [34]
CNCM 4542 1401 human faeces NZ_NMTS00000000.2 106 2.91 55.8 [34]
CNCM 4543 1645 human faeces NZ_NMTT00000000.2 22 3.08 56.2 [34]
CNCM 4544 1627 human faeces NZ_NMTU00000000.1 69 2.80 56.0 [34]
CNCM 4546 2019 human faeces NZ_NMTV00000000.1 244 3.42 54.9 [34]
CNCM 4573 1319 human faeces NZ_NMTW00000000.1 83 3.28 55.9 [34]
CNCM 4574 1821 human faeces NZ_NMTX00000000.1 38 3.09 56.3 [34]
CNCM 4575 1798 human faeces NZ_NMTY00000000.1 37 3.01 57.5 [34]
CNCM 4644 1298 human faeces NZ_NMTZ00000000.1 36 2.92 56.4 [34]
SL3/3 20 Faeces of 46 y.o. female FP929046.1 1 3.21 55.7 [31]
L2–6 29 Faeces of 2 y.o. male FP929045.1 1 3.32 56.8 [3]
M21/2 8.4 Faeces of 36 y.o. female NZ_ABED00000000.2 29 3.13 56.2 [31]
A2–165 395 Faeces of 34 y.o. female NZ_CP022479.1 1 3.11 56.3 [3]
KLE1255 65 N/A NZ_AECU00000000.1 249 2.93 56.3 Weinstock et al. 2010b
2789STDY5608869 N/A human faeces NZ_CYYL00000000.1 49 2.85 57.7 [73]
2789STDY5834970 N/A human faeces NZ_CYXN00000000.1 86 3.05 56.0 [73]
Indica 500 human faeces NZ_CP023819.1 1 2.87 56.9 [56]
AHMP_21 203 human faeces NZ_NOUV00000000.1 85 3.02 57.4 [34]
HMI_19 331 human faeces NZ_NOUW00000000.1 63 2.88 63 [34]
  1. aStrains with completed circular genomes are highlighted in bold
  2. bDirect data submission to NCBI Genbank