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Table 4 Potential targets of miR-729 and transcription factors (TFs) with putative binding sites in the CNE

From: Multiple trans QTL and one cis-regulatory deletion are associated with the differential expression of cone opsins in African cichlids

Putative targets of miR-729

Potential binding TFs in the CNE

1. Retinoic acid receptor alpha-A

2. Retinoic acid receptor RXR-gamma-B

3. Cone-rod homeobox

4. Thyroid hormone receptor alpha

5. Homeobox protein SIX2

6. Thyroid hormone receptor-associated protein 3

1. Cone-rod homeobox

2. Neural Leucine Zipper

3. Orthodenticle Homeobox

4. Microphthalmia-Associated Transcription Factor

5. Retina and Anterior Neural Fold Homeobox

6. Visual System Homeobox

7. Ventral Anterior Homeobox