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Table 2 Identities and relative expression of DEGs associated with anther and pollen development in Wucai

From: Comparative Transcriptome Analysis between Fertile and CMS Flower Buds in Wucai (Brassica campestris L.)

# Gene name Gene ID log2 Ratio (S/F) Up-Down-
Regulation
(S/F)
P-value FDR Nr-ID Annotation Note
1 A6 CL5312.Contig6 −2.944716046 Down 0.000000833 0.0000238 BAG16366.1 Tapetum-specific protein A6 Tapetum
2 ACA2 CL7501.Contig3 −22.02431 Down 1.32E-10 7.15E-09 AAF18608.2 Calcium-transporting ATPase 2, plasma membrane-type  
   CL9430.Contig2 −4.12692914 Down 0.00000702 0.000163392 XP_006404763.1  
   Unigene13893 −20.49563 Down 6.02E-08 0.00000216 AAF18608.2  
3 ACOX1 CL10760.Contig1 −8.01825105 Down 6.27E-11 3.53E-09 XP_006410738.1 Peroxisomal acyl-coenzyme A oxidase 1 Cell wall
4 AGD10 Unigene2844 −22.26378 Down 2.08E-08 0.000000814 XP_006410680.1 ADP-ribosylation factor GTPase-activating protein  
5 AGD13 Unigene3446 −4.082284653 Down 3.42E-18 4.05E-16 XP_006396608.1 ADP-ribosylation factor GTPase-activating protein AGD13  
6 AGL18 Unigene20308 −17.94896 Down 0.000000392 0.0000119 XP_006416569.1 Agamous-like MADS-box protein AGL18  
7 AMS CL228.Contig1 −3.626573007 Down 0.0000214 0.000440987 XP_006409372.1 Transcription factor ABORTED MICROSPORES Tapetum
   CL228.Contig10 −3.211951041 Down 1.49E-09 7.07E-08 XP_006300017.1 Tapetum
   CL228.Contig11 −3.981481531 Down 6.96E-15 6.28E-13 Tapetum
   CL228.Contig2 −3.888023907 Down 1.88E-12 1.3E-10 CAD54298.1 Tapetum
   CL228.Contig3 −6.49960103 Down 0.00000777 0.000178796 Tapetum
   CL228.Contig4 −3.779024655 Down 5.58E-14 4.55E-12 XP_006300017.1 Tapetum
   CL228.Contig7 −3.399639006 Down 1.8E-11 1.11E-09 Tapetum
   CL228.Contig8 −3.618863472 Down 1.7E-09 7.93E-08 CAD54298.1 Tapetum
   CL228.Contig9 −3.282505028 Down 9.96E-10 4.84E-08 XP_006300017.1 Tapetum
8 BT3 Unigene8957 −3.999145848 Down 0.000000327 0.0000102 XP_006307699.1 BTB/POZ and TAZ domain-containing protein 3  
9 CCR2 CL13286.Contig4 −2.618288933 Down 9.76E-09 0.000000404 AEK27166.1 Cinnamoyl-CoA reductase 2 Cell wall
10 ENL2 CL9725.Contig1 −12.9847855 Down 6.75E-08 0.0000024 AAR13697.1 Early nodulin-like protein 2 Tapetum
11 GALE1 CL7725.Contig1 −5.650465262 Down 0.0000241 0.000490652 XP_006391772.1 UDP-glucose 4-epimerase 1  
12 GEX1 CL6689.Contig1 −4.118156527 Down 4.93E-08 0.0000018 XP_006401451.1 Protein GAMETE EXPRESSED 1  
   CL6689.Contig2 −2.506677002 Down 0.0000292 0.000580342  
13 GUN2 CL5998.Contig1 −6.849121307 Down 6.22E-24 1.09E-21 XP_006307252.1 Endoglucanase 2 Cell wall
14 MS1 CL11348.Contig1 −3.49023522 Down 0.0000132 0.000286238 XP_006400732.1 PHD finger protein MALE STERILITY 1 Tapetum
15 MYB39 CL668.Contig2 −4.224047618 Down 0.0000012 0.0000332 NP_200422.1 Transcription factor MYB39 Tapetum
16 NAS2 Unigene9840 −10.01145026 Down 5.04E-33 1.44E-30 XP_006413176.1 Nicotianamine synthase 2  
17 ORTH2 CL8531.Contig2 −6.729731899 Down 3.32E-28 7.15E-26 XP_002886735.1 E3 ubiquitin-protein ligase ORTHRUS 2 Tapetum
   CL8531.Contig6 −6.833897659 Down 4.79E-23 7.97E-21 Tapetum
18 PAL1 Unigene4968 −2.11264418 Down 3.77E-08 0.00000142 ABC69917.1 Phenylalanine ammonia-lyase 1  
19 PAL2 Unigene23252 −3.176980409 Down 0.0000497 0.000916371 ADL09136.1 Phenylalanine ammonia-lyase 2  
20 PEAM3 Unigene26733 −2.067508491 Down 6.93E-08 0.00000246 XP_006390538.1 Phosphoethanolamine N-methyltransferase 3  
21 PGIP2 CL3211.Contig3 −4.490292387 Down 0.0000128 0.000278848 ABX46561.1 Polygalacturonase inhibitor 2 Cell wall
22 PLA2C Unigene36790 −11.00893115 Down 3.58E-16 3.65E-14 XP_006412837.1 Phospholipase A2-gamma  
23 PLRX1 CL9725.Contig2 −11.98149635 Down 3.92E-08 0.00000146 AAR13697.1 Pollen-specific leucine-rich repeat extensin-like protein 1 Tapetum
24 PME5 Unigene14803 −24.662 Down 2.79E-71 3.17E-68 ABC25451.1 Pectinesterase 5 Cell wall
   Unigene37636 −24.55937 Down 3.24E-70 3.45E-67 XP_006397894.1 Cell wall
25 RBG7 Unigene958 −1.955925101 Down 0.00000713 0.000165484 NP_179760.1 Glycine-rich RNA-binding protein 7 Cell wall
26 RGP1 CL5431.Contig2 −3.796328409 Down 2.54E-20 3.52E-18 XP_006408433.1 UDP-arabinose mutase 1 Cell wall
27 TI10A CL3440.Contig3 −1.838249753 Down 0.00000272 0.0000696 XP_006416530.1 jasmonate-zim-domain protein 1  
28 TMK1 Unigene30627 −17.95435 Down 0.00000625 0.000147115 XP_002867400.1 Probable receptor protein kinase Cell wall
29 TSM1 Unigene12653 −4.917563543 Down 0.0000129 0.000281326 NP_564916.2 Tapetum-specific methyltransferase 1 Tapetum
  Unigene4469 −7.200986245 Down 0.00000372 0.0000924 XP_002888647.1 Tapetum
30 ZAT5 CL12866.Contig2 −17.40146 Down 0.0000171 0.000360205 NP_187658.1 Zinc finger protein Cell wall
   CL801.Contig1 −6.072505988 Down 6.22E-16 6.25E-14 XP_006398898.1 Cell wall
   CL801.Contig4 −6.376284185 Down 0.000000604 0.0000178 Cell wall
   CL801.Contig5 −17.48876 Down 0.0000089 0.000202113 XP_002871091.1 Cell wall
31 BT2 Unigene16869 4.243001335 Up 0.0000312 0.000613786 XP_004975990.1 BTB/POZ and TAZ domain-containing protein 2  
32 SCC12 CL8357.Contig1 4.33729296 Up 0.00000218 0.0000571 XP_006405422.1 Sister chromatid cohesion 1 protein 2  
33 TCMO Unigene3794 4.003339344 Up 0.0000226 0.000461499 XP_006410152.1 Trans-cinnamate 4-monooxygenase Cell wall
34 VAL2 CL7862.Contig2 6.699055286 Up 2.06E-15 1.96E-13 NP_194929.2 B3 domain-containing transcription repressor Cell wall
   CL7862.Contig7 8.577233976 Up 1.62E-19 2.14E-17 Cell wall
35 XPO1 CL3131.Contig8 17.77931 Up 0.00000304 0.0000768 XP_006400241.1 Exportin1 (XPO1) like protein