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Table 1 Phenotypic and genomic values, number of raw-reads, number and percentage of mapped reads from the selected 43 Nelore cattle

From: Gene co-expression networks associated with carcass traits reveal new pathways for muscle and fat deposition in Nelore cattle

Animal

REA (cm2)a

GEBV REAb

BFT (mm)c

GEBV BFTd

Raw readse

Mapped readsf

%g

1

56.25

− 2.13

15.00

1.62

24.40

10.30

42.21

2

73.25

3.22

4.00

−0.79

11.81

5.49

46.49

3

67.50

1.39

7.00

−0.91

24.89

16.07

64.56

4

79.00

0.85

7.00

−1.17

11.75

5.86

49.87

5

69.25

0.5

7.00

−0.83

16.43

7.11

43.27

6

58.75

1.51

15.00

1.63

20.40

13.57

66.52

7

58.00

−0.98

7.00

−0.84

19.98

8.27

41.39

8

80.25

2.69

10.00

0.77

23.35

12.62

54.05

9

54.00

−2.76

9.00

−0.02

25.56

16.87

66.00

10

62.50

2.09

14.00

1.63

12.36

5.57

45.06

11

75.25

1.65

6.00

−0.85

18.01

11.88

65.96

12

48.50

−3.54

9.00

−0.06

17.83

8.13

45.60

13

72.00

4.71

6.00

0.07

9.75

6.68

68.51

14

68.75

2.79

10.00

0.93

23.87

17.84

74.74

15

65.50

−0.44

6.00

−0.79

14.20

12.77

89.93

16

73.25

2.92

15.00

1.19

25.60

12.77

49.88

17

75.00

1.36

12.00

1.00

13.85

9.24

66.71

18

58.75

−2.24

9.00

0.73

16.04

12.32

76.81

19

74.75

0.53

5.00

−0.79

13.76

7.09

51.53

20

59.75

−2.13

11.00

1.1

11.20

5.67

50.63

21

71.00

1.16

5.00

−0.88

16.98

11.51

67.79

22

58.75

−2.51

8.00

0.35

18.08

10.12

55.97

23

79.75

3.47

5.00

−1.06

17.10

11.42

66.78

24

62.00

0.29

4.00

−1.02

17.13

11.25

65.67

25

59.75

−0.1

11.00

0.91

19.37

9.15

47.24

26

55.75

−0.86

11.00

1.48

16.22

10.58

65.23

27

52.00

−2.92

8.00

0.49

12.47

5.38

43.14

28

56.75

1.92

9.00

1.37

12.30

6.48

52.68

29

54.00

−2.19

4.00

0.05

15.57

6.67

42.84

30

56.25

−2.67

4.00

−0.5

14.52

6.84

47.11

31

58.00

−1.4

2.50

−1.03

8.79

4.08

46.42

32

66.20

3.22

4.00

−0.37

21.97

10.13

46.11

33

47.75

−2.4

2.00

−0.75

20.65

9.49

45.96

34

50.75

−3.88

6.00

−0.1

18.21

9.35

51.35

35

42.50

−3.45

6.00

0.31

13.29

6.20

46.65

36

51.25

−2.79

5.00

0.09

19.93

9.59

48.12

37

64.50

2.85

4.00

−0.01

17.13

7.75

45.24

38

63.00

2.53

9.00

0.68

20.53

6.40

31.17

39

52.50

−3.95

8.00

0.6

11.31

5.26

46.51

40

54.25

−1.01

12.00

0.93

23.86

11.27

47.23

41

66.75

3.26

3.50

−0.58

25.92

12.83

49.50

42

65.50

2.9

7.50

0.32

13.94

6.41

45.98

43

47.50

−1.67

10.00

1.04

25.05

12.76

50.94

Mean

59.75

0.29

7.00

0.07

17.13

9.35

53.85

SDh

9.50

2.44

3.41

0.87

   
  1. aRibeye area; bgenomic estimated breeding values for REA; cBackfat thickness; dgenomic estimated breeding values for BFT; emillions of raw reads; fmillions of mapped reads; gpercentage of paired-end mapped reads; hStandard Deviation