Gene co-expression networks associated with carcass traits reveal new pathways for muscle and fat deposition in Nelore cattle

Table 3 KEGG Pathways (FDR < 0.05) unique identified by WebGestalt 2017 from the gene list of the Salmon module

KEGG Pathway ID^a	Description	N Gene^b	FDR^c	Gene names
bta00220	Arginine biosynthesis	3	9.41E-03	GOT1, GOT2, GPT2
bta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2	1.75E-02	GOT1, GOT2
bta00650	Butanoate metabolism	3	2.70E-02	HADHA, ACAT1, HADH
bta00310	Lysine degradation	4	3.51E-02	HADHA, DLST, ACAT1, HADH

^aKEGG Pathway Identification (ID); ^bNumber of genes; ^cAdjusted p-value for a false discovery rate (FDR) of 5%

ISSN: 1471-2164