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Table 1 Evaluation of DeepSplice and state-of-the-art approaches for donor (acceptor) site classification on HS3D data set

From: Discerning novel splice junctions derived from RNA-seq alignment: a deep learning approach

  Donor Acceptor
Sensitivity Specificity Q9 Sensitivity Specificity Q9
LS-GKM 0.8679 0.8516 0.8595 0.8403 0.8319 0.8361
SVM + B 0.9406 0.9067 0.9212 0.9066 0.8797 0.8920
MM1-SVM 0.9256 0.9244 0.9247 0.8993 0.8869 0.8926
DM-SVM 0.9469 0.9339 0.9399 0.9215 0.9073 0.9136
MEM 0.9324 0.9275 0.9295 0.9153 0.8843 0.8978
LVMM2 0.9424 0.9242 0.9323 0.9122 0.8970 0.9039
DeepSplice 0.9571 0.9376 0.9465 0.9337 0.9139 0.9232