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Table 5 Seven differentially expressed FTR genes in QTL regions

From: Joint QTL mapping and transcriptome sequencing analysis reveal candidate flowering time genes in Brassica napus L

Gene ID

TAIR ID

Gene

L-log2 Fold change

S-log2 Fold change

Regulator

Pathway

Conditions

BnaA06g30130D

AT5G48560

CIB2

1.310

–

Pos.

Circadian Clock/Photoperiod

LD [no data under SD]

BnaA06g16420D

AT5G63470

NF-YC4

−1.778

–

Pos.

Circadian Clock/Photoperiod

LD only

BnaA06g29740D

AT5G49020

PRMT4A

−2.060

–

Pos.

Autonomous pathway

SD and LD

BnaA06g24000D

AT5G65050

MAF2, AGL31

–

−2.916

Neg.

Ambient temperature

SD and LD

BnaC02g04790D

AT5G13480

FY

1.338

2.312

Pos.

Autonomous pathway

SD and LD

BnaC02g03470D

AT5G02810

PRR7

2.471

3.165

Pos.

Circadian Clock/Photoperiod

LD only

BnaC02g01940D

AT5G06600

UBP13

0.734

1.198

Neg.

Autonomous pathway

SD and LD

  1. L-log2 Fold change: fold changes in leaves early- and late-flowering bulks; S-log2 Fold change: fold changes in shoots between early- and late-flowering bulks; SD short-day conditions, LD long-day conditions, Pos. positive, Neg. negative