Table 5 Summary of Xac DEGs encoding hypothetical proteins regulated by DSF/Rpf-mediated QS during pathogenic process
Locus tag | Log2Fold Change (Wt/∆rpfF) | Homologue [Bacterial species] | Identity (%)c |
|---|---|---|---|
XAC2155 | 1.36 | ferritin-like domain-containing protein [Xanthomonas group] | 99 |
XAC2156 | 1.97 | stress-induced protein [X. phaseoli] | 98 |
XAC3073 | 1.01 | GH18_chitinase-like glycosyl hydrolase [X. citri] | 99 |
XAC3533 | 1.23 | glycosyltransferase, GT2 family [X. axonopodis] | 97 |
XAC3546 | 1.29 | autotransporter adhesion protein [X.citri] | 99 |
XAC0295 | −1.64 | 5-hydroxyisourate hydrolase [X. citri] | 98 |
XAC0297 | −2.93 | 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase [X. citri] | 99 |
XAC0298 | −1.84 | Nuclear transport factor 2 (NTF2-like) superfamily [X. axonopodis] | 99 |
XAC0510 | −1.22 | FUSC-like inner membrane protein (fusaric acid resistance) [X. citri] | 98 |
XAC1397 | −2.05 | Alginate export domain containing protein [X. axonopodis] | 99 |
XAC1471 | −1.12 | Glycine zipper 2TM domain containing protein [X. citri] | 98 |
XAC1827 | −2.41 | Trp repressor protein [Xanthomonas group] | 99 |
XAC1883 | −1.00 | AbrB domain containing transcriptional regulator [X. citri] | 99 |
XAC1884 | −1.26 | PIN (PilT N terminus) domain-containing protein [X. citri] | 99 |
XAC2821 | −1.02 | Crotonase/Enoyl-Coenzyme A (CoA) hydratase [Xanthomonas group] | 99 |
XAC2934 | −1.02 | Fe-S assembly SUF system transcriptional regulator [X. citri] | 99 |
XAC3085 | −1.06 | putative type III secretion system effector protein [Xanthomonas group] | 99 |
XAC3439 | −1.16 | putative secreted protein [Xanthomonas group] | 99 |
XAC3506 | −1.67 | Cellulose belonging to glycosyl hydrolase family 5 [X. citri] | 98 |
XAC3507 | −1.99 | CelS cellulose; Glycosyl hydrolase 12 superfamily [Xanthomonas group] | 98 |
XAC3720 | −1.17 | putative two-component system sensor kinase [Xanthomonas group] | 99 |
XAC3753 | −1.22 | putative chemotaxis membrane protein [Xanthomonas group] | 99 |
XAC3754 | −1.01 | putative chemotaxis membrane protein [Xanthomonas group] | 99 |
XAC3856 | −1.19 | calcium-binding protein, EFh Superfamily [X. citri] | 99 |
XAC4219 | −1.09 | Lipid-binding SYLF domain containing protein [Xanthomonas group] | 99 |