Table 1 Nucleotide, amino acid, scaffold distribution, alternative splice variant and other information for the identified NlGrs
GENE | TMHMM | TMPred | HMMTOP | AA | Nucleic acids(bp) | Scaffold | Predicted alternative splice variant number |
|---|---|---|---|---|---|---|---|
NlGr1 | 8 | 8 | 8 | 436 | 1554 | KN153269.1 | 0 |
NlGr2 | 7 | 8 | 9 | 461 | 1717 | KN153837.1 | 2 |
NlGr3 | 7 | 8 | 8 | 440 | 1631 | KN153837.1 | 0 |
NlGr4 | 4 | 4 | 4 | 265 | 798 | KN153837.1 | 0 |
NlGr5 | 6 | 7 | 7 | 425 | 1670 | KN152938.1 | 0 |
NlGr6 | 5 | 5 | 5 | 488 | 2188 | KN152682.1 | 10 |
NlGr7 | 8 | 8 | 8 | 413 | 1605 | KN153186.1 | 0 |
NlGr8 | 5 | 6 | 6 | 357 | 2176 | KN153141.1 | 10 |
NlGr9 | 4 | 6 | 4 | 400 | 3216 | Â | 10 |
NlGr10 | 7 | 8 | 8 | 471 | 2121 | KN151984.1 | 2 |
NlGr11 | 7 | 7 | 8 | 466 | 1342 | KN152173.1 | 0 |
NlGr12 | 6 | 6 | 6 | 339a | 1785 | KN152706.1 | 0 |
NlGr13 | 8 | 8 | 7 | 401 | 1625 | KN152706.1 | 0 |
NlGr14 | 6 | 6 | 7 | 339 | 1536 | KN152506.1 | 0 |
NlGr15 | 4 | 4 | 6 | 321 | 1604 | KN152468.1 | 2 |
NlGr16 | 4 | 8 | 6 | 383 | 1149 | KN152007.1 | 0 |
NlGr17 | 7 | 8 | 9 | 520 | 1561 | KN152004.1 | 4 |
NlGr18 | 3 | 7 | 6 | 374 | 1308 | KN153751.1 | 3 |
NlGr19 | 3 | 3 | 3 | 218a | 1730 | KN152376.1 | 4 |
NlGr20 | 6 | 7 | 7 | 449 | 2062 | KN152775.1 | 2 |
NlGr21 | 7 | 6 | 8 | 352 | 1435 | KN154548.1 | 0 |
NlGr22 | 6 | 6 | 5 | 370 | 1110 | KN154035.1 | 0 |
NlGr23 | 7 | 7 | 6 | 398 | 1537 | KN153338.1 | 2 |
NlGr24 | 7 | 7 | 7 | 379 | 1141 | KN152091.1 | 0 |
NlGr25 | 3 | 3 | 3 | 218 | 1580 | KN152147.1 | 0 |
NlGr26 | 5 | 5 | 5 | 429 | 1750 | KN152989.1 | 3 |
NlGr27 | 0 | 0 | 0 | 0b | 212 | Â | 0 |
NlGr28 | 6 | 6 | 6 | 357 | 1071 | KN154570.1 | 2 |
NlGr29 | 6 | 6 | 6 | 373 | 2032 | KN152059.1 | 0 |
NlGr30 | 0 | 0 | 0 | 0b | 416 | Â | 0 |
NlGr31 | 3 | 3 | 3 | 153 | 1926 | KN152885.1 | 0 |
NlGr32 | 0 | 0 | 0 | 131 | 394 | KN154495.1 | 0 |