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Table 3 Summary of assembly results of C. angulatus

From: De novo leaf and root transcriptome analysis to explore biosynthetic pathway of Celangulin V in Celastrus angulatus maxim

Sample

Total number

Total length

Mean length

N50

GC(%)

Leaf_1-Conting

109,851

94,892,188

863

1648

41.71

Leaf_2-Conting

95,389

82,261,657

862

1593

41.82

Leaf_3-Conting

98,035

84,748,426

864

1609

41.67

Root_1-Conting

86,993

72,550,947

833

1538

42.16

Root_2-Conting

83,316

66,867,324

802

1460

42.41

Root_3-Conting

86,799

73,974,071

852

1589

42.27

Leaf_1-Unigene

77,255

74,938,903

970

1720

41.65

Leaf_2-Unigene

67,225

64,632,431

961

1657

41.76

Leaf_3-Unigene

69,274

66,633,515

961

1659

41.62

Root_1-Unigene

60,493

56,082,948

927

1583

42.11

Root_2-Unigene

56,701

50,673,238

893

1504

42.38

Root_3-Unigene

60,373

57,304,625

949

1637

42.21

All- Unigene

104,950

125,979,466

1200

2011

41.61

  1. N50: a weighted median statistic that 50% of the Total Length is contained in Transcripts great than or equal to this value