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Table 5 List of differentially regulated proteins identified in all fish-adapted GBS strains compared to the NEM316 strain

From: Delineation of the pan-proteome of fish-pathogenic Streptococcus agalactiae strains using a label-free shotgun approach

Up/Downa Accessionb Productc SA16 fold-changed SA20 fold-changed SA53 fold-changed SA81 fold-changed SA95 fold-changed
Down GBS_RS00535 50S ribosomal protein L6 −4.57 −3.45 − 4.69 − 4.37 − 1.78
Down SaSA20_0140 Fe-S assembly protein NifU −4.23 −2.33 −3.59 − 1.40 − 1.12
Down GBS_RS01110 Acetate kinase −2.95 −1.73 −2.03 − 1.42 − 1.15
Down SaSA20_0551 Beta-lactamase −5.34 −5.25 −4.93 − 5.62 −1.32
Down SaSA20_0944 thrB Homoserine kinase −4.67 −3.52 −2.85 − 3.46 − 4.69
Down SaSA20_1545 Peptidase S66 −1.84 − 1.06 − 1.83 − 1.02 −1.16
Down GBS_RS09900 Proline--tRNA ligase −3.45 − 3.01 − 3.36 −2.68 − 2.93
Down SaSA20_1738 DHH family phosphoesterase −3.99 −2.65 −2.69 −1.84 − 2.15
Down SaSA20_1009 Dihydroorotate dehydrogenase −2.62 −2.13 −3.66 −1.22 −1.58
Down SaSA53_1431 3-hydroxybutyryl-CoA dehydrogenase −1.30 −2.33 −1.71 − 1.64 −1.21
Down GBS_RS01730 Hypothetical protein −4.30 −4.42 −3.84 − 4.19 −1.16
Up GBS_RS07220 DNA (cytosine-5-)-methyltransferase 6.76 2.53 7.20 5.40 1.05
Up GBS_RS07415 ABC transporter ATP-binding protein 2.06 3.34 1.40 3.30 2.38
Up SaSA20_0474 mlcE 1.55 2.47 2.62 2.06 1.37
Up SaSA20_0529 gyrB DNA gyrase subunit B 5.10 6.07 5.44 5.55 2.71
Up SaSA20_1579 galE_2 UDP-glucose 4-epimerase 1.07 1.52 1.45 1.69 1.02
Up SaSA20_0382 Reticulocyte binding protein 4.98 4.52 5.45 4.21 1.51
Up SaSA20_0123 argH Argininosuccinate lyase 1.74 2.78 2.58 2.05 1.97
Up SaSA95_0249 cglA Competence protein 6.16 7.67 6.80 6.31 5.25
Up SaSA20_0173 Thioredoxin 3.14 3.43 3.52 3.71 1.03
Up SaSA53_0400 Hypothetical protein 3.86 3.72 7.25 4.21 1.78
Up SaSA20_0423 GNAT family acetyltransferase 3.36 5.04 5.44 5.31 1.94
Up SaSA20_0437 asnA Aspartate--ammonia ligase 4.12 3.94 3.28 3.90 1.46
Up SaSA20_0674 nagB Glucosamine-6-phosphate deaminase 4.61 5.11 6.03 3.37 2.54
Up SaSA20_0995 LytR family transcriptional regulator 2.58 2.06 1.94 2.97 1.15
Up SaSA20_1068 fni Isopentenyl-diphosphate delta-isomerase 4.28 4.82 4.21 5.04 1.77
Up SaSA20_1080 Antibiotic ABC transporter ATP-binding protein 2.07 2.42 1.73 2.42 1.02
Up SaSA20_1112 thiI tRNA sulfurtransferase 3.29 2.89 2.73 3.08 1.29
Up SaSA20_1168 sigA RNA polymerase sigma factor 3.52 5.44 4.82 4.98 1.77
Up SaSA20_1173 Amino acid ABC transporter substrate-binding protein 1.43 2.94 1.35 1.86 1.41
Up SaSA20_1287 3-phosphoglycerate dehydrogenase 1.03 2.35 2.37 1.31 1.27
Up SaSA20_1317 Non-canonical purine NTP pyrophosphatase 2.09 2.20 3.83 2.47 1.38
Up SaSA53_1361 Non-canonical purine NTP pyrophosphatase 2.09 2.20 3.83 2.47 1.38
Up SaSA20_1402 scrK Fructokinase 2.78 1.32 2.16 3.81 2.31
Up SaSA20_1492 hypothetical protein 3.04 2.26 3.15 3.02 1.29
Up SaSA20_1499 dltA 2.74 3.09 2.94 3.38 1.09
Up SaSA20_1688 ABC transporter ATP-binding protein 8.13 7.87 7.46 7.26 3.66
Up SaSA20_1692 Glyoxalase 2.32 3.16 2.77 3.06 1.43
Up SaSA20_1762 arcB Ornithine carbamoyltransferase 2.85 2.82 2.71 3.01 1.09
Up SaSA16_1675 Hypothetical protein 1.91 2.40 2.35 2.81 3.39
  1. aRegulation of protein expression
  2. bLocus tag of protein
  3. cProtein product name
  4. dFold-change is the log2 of ratio between fish-adapted GBS strains and NEM316 proteins abundance