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Table 2 Effect of light and carS mutation on the expression of relevant gene groups

From: Comparative transcriptomic analysis unveils interactions between the regulatory CarS protein and light response in Fusarium

Gene (FFUJ_ annotation)

Protein

Fold-change by light

Fold-change in carS mutant

Fold-change by light in carS mutant

carS and structural carotenoid genes

 carX (11801)

Carotenoid dioxygenase

96.6

114.7

4.0

 carRA (11802)

Synthase / cyclase

70.4

208.8

< 2

 carB (11803)

Desaturase

78.2

160.7

< 2

 carO (11804)

Rhodopsin

296.8

416.9

3.9

 carT (07962)

Carotenoid dioxygenase

11.7

35.1

< 2

 carD (07503)

Aldehyde dehydrogenase

3.7

6.1

< 2

 carS (08714)

RING finger protein

5.5

7.4

2.5

Other posible carotenoid genes

 (10321)

Putative retinol dehydrogenase

107.5

334.3

2.2

 (00634)

Putative retinaldehyde dehydrogenase

−3,9

−3,1

> − 2

Photoreceptor genes

 (00436)

Putative photolyase

35.1

3.7

9.2

 cryD (05732)

DASH cryptochrome

57.4

12,6

6.9

 vvdA (06055)

Flavin photoreceptor

87.4

< 2

59.3

 wcoA (13691)

White Collar flavin photoreceptor

< 2

< 2

< 2

Stress-related genes

 (05128)

Catalase

79.1

133.8

2.1

 (11472)

Catalase

54.7

365.1

< 2

 (03407)

Catalase

6.7

25.7

< 2

 (09119)

Amine oxidase-dehydrogenase

452.5

235.9

2.1

 (09320)

Rds1-related

291.4

125.5

4.5

 (01993)

Peroxiredoxin subfamily

55.7

35.6

3.0

  1. The genes located in the car cluster are in bold