Table 2 Prediction of miRNA precursor of lncRNA
MiRNA ID | LncRNA ID | MiRNA precursor length (nt) | LncRNA length (nt) | Alignment length (nt) | E-value | Alignment ratio |
|---|---|---|---|---|---|---|
osa-miR1428b | LTCONS_00009984* | 124 | 22,003 | 124 | 3.00E-65 | 1 |
osa-miR1428b | LTCONS_00009985* | 124 | 20,702 | 124 | 3.00E-65 | 1 |
osa-miR1428b | LTCONS_00009986* | 124 | 20,691 | 124 | 3.00E-65 | 1 |
osa-miR1428b | LTCONS_00009987* | 124 | 22,838 | 124 | 3.00E-65 | 1 |
osa-miR1428d | LTCONS_00009984* | 124 | 22,003 | 124 | 9.00E-44 | 0.919 |
osa-miR1428d | LTCONS_00009985* | 124 | 20,702 | 124 | 9.00E-44 | 0.919 |
osa-miR1428d | LTCONS_00009986* | 124 | 20,691 | 124 | 9.00E-44 | 0.919 |
osa-miR1428d | LTCONS_00009987* | 124 | 22,838 | 124 | 9.00E-44 | 0.919 |
osa-miR156d | LTCONS_00037940 | 129 | 1438 | 129 | 3.00E-68 | 1 |
osa-miR156d | LTCONS_00037941 | 129 | 7353 | 129 | 3.00E-68 | 1 |
osa-miR156d | LTCONS_00037942* | 129 | 5325 | 129 | 3.00E-68 | 1 |
osa-miR156i | LTCONS_00042575 | 90 | 1718 | 90 | 4.00E-45 | 1 |
osa-miR159b | LTCONS_00000263 | 188 | 2026 | 188 | 3.00E-103 | 1 |
osa-miR160a | LTCONS_00032617 | 88 | 6768 | 88 | 6.00E-44 | 1 |
osa-miR160a | LTCONS_00037788* | 88 | 2442 | 88 | 6.00E-44 | 1 |
osa-miR160b | LTCONS_00074702 | 131 | 2815 | 131 | 8.00E-60 | 0.921 |
osa-miR162a | LTCONS_00035247* | 171 | 2307 | 171 | 4.00E-93 | 1 |
osa-miR166b | LTCONS_00079180* | 206 | 6730 | 206 | 9.00E-107 | 0.981 |
osa-miR166d | LTCONS_00035558* | 125 | 3329 | 125 | 8.00E-66 | 1 |
osa-miR166h | LTCONS_00042628* | 119 | 4024 | 119 | 3.00E-62 | 1 |
osa-miR166k | LTCONS_00042628* | 127 | 4024 | 127 | 5.00E-67 | 1 |
osa-miR171c | LTCONS_00062303* | 99 | 3985 | 99 | 8.00E-47 | 0.98 |
osa-miR172b | LTCONS_00012871* | 238 | 4300 | 238 | 6.00E-133 | 1 |
osa-miR1846d | LTCONS_00006050 | 116 | 5861 | 116 | 2.00E-60 | 1 |
osa-miR1846d | LTCONS_00006052* | 116 | 5547 | 116 | 2.00E-60 | 1 |
osa-miR1846d | LTCONS_00006054 | 116 | 4851 | 116 | 2.00E-60 | 1 |
osa-miR1848 | LTCONS_00032626 | 63 | 4883 | 69 | 4.00E-07 | 0.921 |
osa-miR1850 | LTCONS_00070604 | 133 | 1974 | 133 | 5.00E-67 | 0.985 |
osa-miR1863a | LTCONS_00033360* | 374 | 8365 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033362 | 374 | 12,189 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033363 | 374 | 11,237 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033364* | 374 | 8172 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033365* | 374 | 10,187 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033366 | 374 | 12,392 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033368* | 374 | 10,972 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033369* | 374 | 10,069 | 374 | 0 | 1 |
osa-miR1863a | LTCONS_00033371* | 374 | 12,855 | 374 | 0 | 1 |
osa-miR1863b | LTCONS_00026174 | 360 | 10,196 | 360 | 4.00E-172 | 0.981 |
osa-miR1863c | LTCONS_00026174 | 291 | 10,196 | 291 | 1.00E-140 | 0.979 |
osa-miR1878 | LTCONS_00096092 | 100 | 6930 | 100 | 2.00E-41 | 0.98 |
osa-miR2118j | LTCONS_00056168 | 164 | 5137 | 164 | 1.00E-74 | 0.936 |
osa-miR2118m | LTCONS_00056168 | 170 | 5137 | 170 | 3.00E-78 | 0.982 |
osa-miR2867 | LTCONS_00020748 | 101 | 4991 | 100 | 3.00E-46 | 0.98 |
osa-miR2867 | LTCONS_00020749 | 101 | 5318 | 100 | 3.00E-46 | 0.98 |
osa-miR390 | LTCONS_00053270* | 91 | 3035 | 91 | 4.00E-42 | 0.967 |
osa-miR394 | LTCONS_00042593* | 110 | 3523 | 110 | 6.00E-57 | 1 |
osa-miR399i | LTCONS_00038421 | 116 | 5367 | 116 | 2.00E-60 | 1 |
osa-miR439a | LTCONS_00009363* | 93 | 5016 | 93 | 7.00E-47 | 1 |
osa-miR439b | LTCONS_00009363* | 60 | 5016 | 58 | 2.00E-21 | 0.917 |
osa-miR439c | LTCONS_00009363* | 93 | 5016 | 93 | 7.00E-47 | 1 |
osa-miR439d | LTCONS_00009363* | 98 | 5016 | 98 | 1.00E-42 | 0.969 |
osa-miR439e | LTCONS_00009363* | 98 | 5016 | 98 | 8.00E-50 | 1 |
osa-miR439f | LTCONS_00009363* | 96 | 5016 | 96 | 1.00E-48 | 1 |
osa-miR439g | LTCONS_00009363* | 88 | 5016 | 87 | 2.00E-43 | 0.989 |
osa-miR439h | LTCONS_00009363* | 99 | 5016 | 99 | 5.00E-48 | 0.99 |
osa-miR444a | LTCONS_00089505 | 126 | 4370 | 126 | 2.00E-54 | 0.939 |
osa-miR444b | LTCONS_00040186* | 138 | 2386 | 138 | 2.00E-73 | 1 |
osa-miR444d | LTCONS_00041518 | 143 | 2640 | 143 | 2.00E-76 | 1 |
osa-miR444d | LTCONS_00041519 | 143 | 2656 | 159 | 2.00E-54 | 1 |
osa-miR5150 | LTCONS_00055710 | 79 | 5612 | 79 | 5.00E-29 | 0.975 |
osa-miR5179 | LTCONS_00033804* | 224 | 5064 | 224 | 1.00E-124 | 1 |
osa-miR5179 | LTCONS_00033805* | 224 | 5393 | 224 | 1.00E-124 | 1 |
osa-miR535 | LTCONS_00023938 | 94 | 7835 | 94 | 7.00E-44 | 0.968 |
osa-miR6246 | LTCONS_00043017 | 84 | 4204 | 84 | 5.00E-32 | 0.976 |
osa-miR7695 | LTCONS_00001730 | 487 | 2728 | 487 | 0 | 1 |
osa-miR7695 | LTCONS_00001731 | 487 | 2349 | 487 | 0 | 1 |
osa-miR812q | LTCONS_00006225* | 242 | 3184 | 243 | 2.00E-83 | 0.917 |