Dynamic expression and functional analysis of circRNA in granulosa cells during follicular development in chicken

BMC Genomics

Table 1 Summary of sequencing results in chicken follicle granulosa cells at three stages

Sample name	Raw reads	Clean reads	Clean bases(G)	Error rate (%)	Q20(%)	Q30(%)	GC content (%)
SYF_G1	131,299,528	126,740,456	19.02	0.02	97.79	94.08	63.83
SYF_G2	82,915,238	80,310,590	12.04	0.02	97.72	94	60.01
SYF_G3	98,659,966	93,718,020	14.06	0.02	98.5	95.84	64.42
F6_G1	99,351,574	96,134,560	14.42	0.03	96.7	91.88	56.73
F6_G2	116,147,306	112,324,754	16.84	0.03	96.56	91.59	56.51
F6_G3	78,903,074	77,034,298	11.56	0.02	97.19	92.84	58.72
F1_G1	86,269,822	84,474,248	12.68	0.03	95.97	90.25	60.02
F1_G2	81,267,114	78,272,912	11.74	0.02	97.38	93.12	60.74
F1_G3	89,875,644	86,894,440	13.04	0.02	97.81	94.09	62.05
Total	864,689,266	835,904,278					60.34

Note: SYF: small yellow follicle, F6: smallest hierarchal follicle, F1: largest hierarchal follicle; G: granulosa cell;

ISSN: 1471-2164