Fig. 5

Circular cladogram of COPII protein complex. Molecular Phylogenetic analysis by Maximum Likelihood method. The evolutionary history was inferred by using the Maximum Likelihood method based on the JTT matrix-based model [44]. The bootstrap consensus tree inferred from 500 replicates [45] is taken to represent the evolutionary history of the taxa analyzed [45]. Branches corresponding to partitions reproduced in less than 50% bootstrap replicates are collapsed. Initial tree(s) for the heuristic search were obtained automatically by applying Neighbor-Join and BioNJ algorithms to a matrix of pairwise distances estimated using a JTT model, and then selecting the topology with superior log likelihood value. The analysis involved 101 amino acid sequences. All positions containing gaps and missing data were eliminated. There were a total of 20 positions in the final dataset. Evolutionary analyses were conducted in MEGA7 [29]. Hs, Homo sapiens; Mm, Mus musculus; At, Arabidopsis thaliana; Sc, Saccharomyces cerevisiae; Pf, Plasmodium falciparum; Pk, Plasmodium knowlesi; Pv, Plasmodium vivax; Py, Plasmodium yoelii yoelii; Pc, Plasmodium chabaudi chabaudi; Pb, Plasmodium berghei; Tg, Toxoplasma gondii; Cp, Cryptosporidium parvum; Bb, Babesia bovis; Ta, Theileria annulata; Nc, Neospora caninum; Et, Eimeria tenella; Tp, Theileria parva; Ps, Phytophthora sojae