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Table 2 The major genes modulated in SJ51M and its corresponding wild type strain SJ51 after carbendazim exposure

From: Molecular characterization of carbendazim resistance of Fusarium species complex that causes sugarcane pokkah boeng disease

Gene ID

Log2 (Fold change)

Gene annotation

SJ51_E vs SJ51_C

SJ51M_E vs SJ51M_C

SJ51M_C vs SJ51_C

SJ51M_E vs SJ51_E

FVER_05972

–

4.0095a

–

2.2519a

Glyoxalase/Bleomycin resistance pro- tein/Dioxygenase superfamily

FVER_12450

1.6720a

3.4288a

0.1681

1.9312a

Glyoxalase/Bleomycin resistance pro- tein/Dioxygenase superfamily

FVER_11289

−0.1793

− 0.2528

1.8589a

1.7887a

Multidrug resistance protein CDR2

FVER_09237

−0.6985

0.6653

1.0074

2.2519a

Multidrug resistance protein fnx1

FVER_12798

−0.3570

−1.5140a

0.7393

−0.4143

Multidrug resistance protein CDR1

FVER_09560

0.0170

−0.8521

2.8984a

2.0326a

ABC transporter CDR4

FVER_04236

−0.0264

− 0.4497

1.0549a

0.6350

Probable MFS multidrug resistance transporter

FVER_10334

2.5884a

1.2424

1.3038

− 0.0260

Pleiotropic ABC efflux transporter of multiple drugs

FVER_03030

−0.3064

0.1645

2.6240a

3.0980a

Related to ATP-binding multidrug cassette transport protein

FVER_05891

0.0651

−0.3041

1.2302a

0.8643

Probable ATP-binding multidrug cassette transport protein

FVER_03551

0.1228

1.1575a

0.2902

1.3278a

ABC transporter ATP-binding protein

FVER_11889

−0.3146

0.0465

2.5807a

2.8235a

Caffeine resistance protein 5

FVER_01165

2.6628a

2.3188a

1.3811

1.0704 a

Metal resistance protein YCF1

FVER_03117

−0.9540

−0.0568

1.4012a

2.3016 a

Heat shock protein 60, mitochondrial

FVER_04661

−0.7160

0.4776

1.2237a

2.4205a

Heat shock protein 78, mitochondrial

FVER_04571

−0.6983

0.2399

1.1257a

2.0672a

Probable heat shock protein HSP104

FVER_12593

−0.3875

0.1239

0.9569

1.4716a

Heat shock protein sti1 homolog

FVER_02883

−0.7821

0.3016

1.0488a

2.1358a

Heat shock 70 kDa protein

FVER_09674

0.0077

0.1043

0.9416

1.0415a

Heat shock 70 kDa protein

FVER_01860

−1.1244a

0.5785

0.9860

2.6906a

Probable FES1-Hsp70 nucleotide exchange factor

FVER_11673

−0.9108

0.6567

0.7528

2.3235a

Heat shock 70 kDa protein

FVER_10345

−0.6977

0.2154

1.1314a

2.0537a

Heat shock protein 90

FVER_09151

−1.4554a

0.1075

1.9281a

3.4943a

Related to heat shock protein 30

FVER_04255

0.1770

−0.5574

1.1400a

0.4186

Probable chaperone protein HSP31

FVER_08232

−0.2435

0.5509

−1.0321a

− 0.2344

Catalase

FVER_08876

−0.1428

0.4837

1.5837a

2.2136a

Catalase

FVER_11010

−0.6185

0.1034

0.9058

1.6309a

Thioredoxin

FVER_02416

−0.1779

2.1616a

− 0.1494

2.1632a

Related to thioredoxin reductase

FVER_07248

−0.6687

−0.7614

1.1560a

1.0657a

Related to DSBA-like thioredoxin domain protein

FVER_13986

0.4550

1.4076a

0.3056

1.2617a

Related to cytosolic Cu/Zn superoxide dismutase

FVER_05859

1.2131a

0.5427

1.2630a

0.5976

Cytochrome P450 52A3-A

FVER_11192

−0.0087

0.0414

1.6595a

1.7130a

Cytochrome P450 52A6

FVER_08550

1.0365

−1.0307

2.2312a

0.1358

Related to Glutathione S-transferase II

FVER_09899

0.0960

−0.2003

1.5924a

1.2997a

Related to microsomal glutathione S-transferase 3

FVER_00097

−0.4491

−0.5106

1.4609a

1.4023a

Glutathione S-transferase

FVER_09254

1.4333a

0.3586

0.2223

− 0.8490

Beta-tubulin 2

FVER_09965

−1.6756a

0.3958

−1.3325

0.7231

Probable kinesin-related protein KIP3

FVER_10733

3.9528a

2.0084a

0.1825

−1.7512a

Kinesin-like protein KIP3

FVER_05071

0.2857

1.1278a

− 0.7088

0.1354

Kinesin-like protein klpA

FVER_08360

0.6639

3.7064a

− 1.4850a

1.5549a

Kinesin family member 1/13/14

FVER_00402

−0.3106

1.6102a

− 0.6439

1.2774a

GTP-binding protein rhoC

  1. aIndicateed significantly differential expression. SJ51_C and SJ51M_C represented without carbendazim treatment, while SJ51_E and SJ51M_E represented exposed to carbendazim treatment. The cut-off limit of DEGs was less than 0.05 FDR and greater than 2-fold change. -, no expression was detected in SJ51_C and the expression abundance was very low in SJ51_E