Table 2 Differentially expressed genes (DEG) that constantly increase (subcluster 4) and decrease (subclusters 7 and 11) their transcript levels during fruit development stages in P. americana cv. ‘Hass’. Subclusters were selected from gene expression cluster analysis
From: De novo assembly of Persea americana cv. ‘Hass’ transcriptome during fruit development
+Contig ID | Gene ID | Contig annotation | Sub-cluster |
|---|---|---|---|
CBV_PAM10189 | AGT63296 | Oleosin | 4 |
CBV_PAM50790 | XP_010938396 | Beta-glucosidase 22-like | 4 |
CBV_PAM74617 | AFG26325 | Cinnamoyl-CoA reductase | 4 |
CBV_PAM23929 | XP_007042920 | UDP-glucosyltransferase 85A4 | 4 |
CBV_PAM2452 | CAC81811 | Putative chitinase 1 | 4 |
CBV_PAM11370 | KHN19579 | Auxin-induced protein 5NG4 | 4 |
CBV_PAM38155 | XP_010279539 | Zeatin O-glucosyltransferase-like | 4 |
CBV_PAM3819 | XP_010261262 | Ethylene-responsive transcription factor RAP2–4-like | 4 |
CBV_PAM37547 | XP_010929602 | Bidirectional sugar transporter SWEET14-like | 7 |
CBV_PAM51147 | XP_010023633 | Protein RALF-like 32 | 7 |
CBV_PAM51593 | XP_010251703 | Neutral ceramidase-like | 7 |
CBV_PAM17119 | ALG05139 | Polyphenol oxidase | 7 |
CBV_PAM55044 | XP_010910148 | Polyphenol oxidase | 7 |
CBV_PAM52108 | XP_010924766 | Neutral ceramidase-like isoform X2 | 7 |
CBV_PAM11012 | XP_010270351 | ABC transporter G family member 5-like | 7 |
CBV_PAM38418 | XP_010261893 | LRR receptor-like serine/threonine-protein kinase | 7 |
CBV_PAM25422 | XP_010263506 | Probable serine/threonine-protein kinase | 7 |
CBV_PAM1216 | XP_012475944 | 14 kDa proline-rich protein DC2.15-like | 11 |
CBV_PAM51355 | AAL23676 | Delta-12 fatty acid desaturase | 11 |
CBV_PAM51992 | XP_012488766 | 14 kDa proline-rich protein DC2.15-like | 11 |
CBV_PAM1011 | XP_010675675 | Fatty acid desaturase 4, chloroplastic | 11 |
CBV_PAM10195 | XP_008811043 | Proline-rich protein 4 | 11 |
CBV_PAM64888 | XP_009395434 | Probable polygalacturonase | 11 |
CBV_PAM10256 | XP_010047989 | 36.4 kDa proline-rich protein-like | 11 |