Table 1 The 15 epigenomes used in this research
From: DeepHistone: a deep learning approach to predicting histone modifications
Epigenome ID (EID) | Anatomy | Histone marker | |||||||
|---|---|---|---|---|---|---|---|---|---|
H3K4me1 | H3K4me3 | H3K27me3 | H3K36me3 | H3K9me3 | H3K9ac | H3K27ac | Total | ||
E003 | ESC | 342,503 | 213,546 | 231,823 | 424,644 | 322,656 | 155,558 | 236,273 | 1,460,537 |
E005 | ESC_DERIVED | 433,887 | 166,189 | 107,589 | 456,459 | 287,790 | 71,753 | 258,471 | 1,349,880 |
E006 | ESC_DERIVED | 462,960 | 163,290 | 130,314 | 487,545 | 278,273 | 168,264 | 289,090 | 1,547,640 |
E007 | ESC_DERIVED | 263,177 | 159,076 | 69,494 | 192,670 | 149,941 | 294,433 | 118,545 | 957,424 |
E008 | ESC | 147,743 | 208,835 | 80,768 | 336,585 | 234,898 | 168,324 | 129,238 | 1,050,986 |
E017 | LUNG | 548,594 | 191,906 | 506,666 | 682,735 | 531,686 | 273,512 | 382,596 | 2,302,996 |
E114 | LUNG | 651,428 | 362,931 | 483,416 | 585,379 | 216,237 | 381,391 | 430,496 | 1,979,536 |
E117 | CERVIX | 593,890 | 285,181 | 406,167 | 347,919 | 95,082 | 260,910 | 347,656 | 1,533,734 |
E118 | LIVER | 541,823 | 271,863 | 205,199 | 340,891 | 246,440 | 220,457 | 278,768 | 1,451,201 |
E119 | BREAST | 563,758 | 192,740 | 260,776 | 242,863 | 376,845 | 232,169 | 366,810 | 1,566,171 |
E121 | MUSCLE | 591,321 | 244,747 | 708,930 | 483,319 | 156,381 | 356,341 | 486,568 | 2,110,799 |
E122 | VASCULAR | 582,593 | 211,344 | 404,019 | 317,600 | 252,718 | 260,503 | 360,372 | 1,617,712 |
E124 | BLOOD | 839,651 | 431,883 | 597,823 | 1,098,084 | 570,919 | 268,232 | 655,859 | 2,981,094 |
E125 | BRAIN | 627,409 | 258,248 | 321,184 | 400,306 | 178,567 | 359,857 | 424,867 | 1,629,166 |
E127 | SKIN | 708,918 | 289,273 | 466,659 | 513,074 | 186,065 | 302,827 | 416,314 | 1,900,958 |