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Table 4 The DEGs enriched in the pathways related to skin development between short-hair and long-hair rabbits

From: Analyses of histological and transcriptome differences in the skin of short-hair and long-hair rabbits

Pathway

DEGs

Up

Down

ECM-receptor interaction

 

CHAD, COL1α2, COL3α1, COL5α2, COL5α3, FN1, ITGB3, LAMA4, LAMC3, LOC103346304, SPP1, THBS2, TNN, TNXB, VWF

Basal cell carcinoma

FZD5, GLI1, HHIP, LEF1, LOC100355594, PTCH1, PTCH2, SHH, TCF7, WNT11, WNT5A

 

Hedgehog signalling pathway

GLI1, HHIP, LOC100341681, PTCH1, PTCH2, SHH, WNT11, WNT5A

GAS1,

TGF-beta signalling pathway

BAMBI, BMP7, LOC100008826, PPP2R1B, LOC100341360, LOC103347033, SMAD6, SMAD7,

SMAD9, TGFBR2, TGFB3, INHBA,

Wnt signalling pathway

BAMBI, FZD5, LEF1, LOC100341681, LOC100355594, TCF7, WNT11, WNT5A

DAAM2, DKK2,

Notch signalling pathway

 

DTX3L, DTX4

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BMC Genomics

ISSN: 1471-2164

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