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Table 6 Top 10 shared genetic pathways between RA and other SCFAs (acetic acid, propionic acid) and methane (top one ranked metabolite)

From: Data-driven multiple-level analysis of gut-microbiome-immune-joint interactions in rheumatoid arthritis

RA ∩ Acetic acid

RA ∩ Propionic acid

RA ∩ Methane

IL 2 signaling pathway

Interleukin-6 signaling

Regulation of hematopoiesis by cytokines

Trka Receptor Signaling Pathway

IL 5 Signaling Pathway

Cytokine Network

IL 5 Signaling Pathway

Antigen Dependent B Cell Activation

Dendritic cells in regulating TH1 and TH2 Development

Cadmium induces DNA synthesis and proliferation in macrophages

Organic cation/anion/zwitterion transport

Antigen Dependent B Cell Activation

Role of ERBB2 in Signal Transduction and Oncology

Dendritic cells in regulating TH1 and TH2 Development

Cytokines and Inflammatory Response

Interleukin-6 signaling

Trafficking of GluR2-containing AMPA receptors

IL 17 Signaling Pathway

IL2 signaling events mediated by STAT5

Regulation of hematopoiesis by cytokines

IL 2 signaling pathway

RB Tumor Suppressor/Checkpoint Signaling in response to DNA damage

Role of ERBB2 in Signal Transduction and Oncology

STAT3 Pathway

IL2 signaling events mediated by PI3K

Folate biosynthesis

Activation of Csk by cAMP-dependent Protein Kinase Inhibits Signaling through the T Cell Receptor

Interleukin 13 (IL-13) Pathway

Cytokine Network

GATA3 participate in activating the Th2 cytokine genes expression