Table 1 Summary of the sequencing data of ‘Hujingmilu’ (‘HJ’) and ‘Yulu’ (‘YL’) peach and ‘Ponkan’ (‘PK’) and ‘Yellowish-peeled Ponkan’ (‘YP’) mandarin libraries with either 125 bp or 150 bp paired-end read lengths
From: A high-throughput SNP discovery strategy for RNA-seq data
Samples | Clean Read Number | Base Number | GC Content (%) | N (%) | Q20 (%) | Q30 (%) |
|---|---|---|---|---|---|---|
HJ-125 bp | 22,182,670 | 5,585,820,171 | 45.96 | 0.01 | 92.64 | 87.38 |
YL-125 bp | 20,122,397 | 5,066,451,719 | 46.06 | 0.01 | 92.69 | 87.41 |
HJ-150 bp | 25,905,927 | 7,736,134,266 | 46.14 | 0.00 | 95.46 | 89.74 |
YL-150 bp | 21,836,682 | 6,522,644,616 | 46.48 | 0.00 | 93.88 | 86.88 |
PK-150 bp | 29,498,009 | 8,784,662,004 | 44.48 | 0.00 | 96.74 | 92.90 |
YP-150 bp | 23,641,003 | 7,038,555,478 | 44.34 | 0.00 | 96.79 | 93.00 |