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Table 2 Genes differentially expressed in ISIAH and WAG brain stems and referred to in Rat Genome Database as associated with central nervous system diseases

From: The differences in brain stem transcriptional profiling in hypertensive ISIAH and normotensive WAG rats

Gene symbol

Gene_ID

log2

(fold_change) ISIAH/WAG

Gene definition

Abcg2

312382

1.84

ATP-binding cassette, subfamily G (WHITE), member 2

Acadsb

25618

−0.61

acyl-CoA dehydrogenase, short/branched chain

Acta2

81633

−0.74

smooth muscle alpha-actin

Aldh1a1

24188

0.51

aldehyde dehydrogenase 1 family, member A1

Aldh1a2

116676

−0.67

aldehyde dehydrogenase 1 family, member A2

Aoc3

29473

−1.40

amine oxidase, copper containing 3 (vascular adhesion protein 1)

Atp10a

365266

−0.75

ATPase, class V, type 10A

Bmp6 #

25644

−0.65

bone morphogenetic protein 6

Cadps2

312166

0.56

Ca++ − dependent secretion activator 2

Car8

297814

1.29

carbonic anhydrase 8

Casp4

114555

1.07

caspase 4, apoptosis-related cysteine peptidase

Cbs

24250

0.54

cystathionine beta synthase

Cckbr

25706

−1.25

cholecystokinin B receptor

Chi3l1

89824

−1.36

chitinase 3-like 1 (cartilage glycoprotein-39)

Col1a1

29393

−0.73

collagen, type I, alpha 1

Col3a1

84032

−1.08

collagen, type III, alpha 1

Col6a3

367313

−0.87

procollagen, type VI, alpha 3

Cyp11a1

29680

2.55

cytochrome P450, family 11, subfamily a, polypeptide 1

Cyp11b2

24294

1.12

cytochrome P450, family 11, subfamily b, polypeptide 2

Des

64362

−0.90

desmin

Eif3c

293484

−0.52

eukaryotic translation initiation factor 3, subunit C

Ephx2 #

65030

4.23

epoxide hydrolase 2, cytoplasmic

Ercc2

308415

−2.96

excision repair cross-complementing rodent repair deficiency, complementation group 2

F2r #

25439

0.81

coagulation factor II (thrombin) receptor

Fhit

60398

2.12

fragile histidine triad gene

Flna

293860

−0.58

filamin A, alpha

Fn1

25661

−1.30

fibronectin 1

Gabra6 #

29708

3.65

gamma-aminobutyric acid (GABA) A receptor, alpha 6

Gabrd

29689

1.22

gamma-aminobutyric acid (GABA) A receptor, delta

Grm2

24415

−2.74

glutamate receptor, metabotropic 2

Gstm2

24424

−1.10

glutathione S-transferase mu 2

Gucy1a3

497757

−0.69

guanylate cyclase 1, soluble, alpha 3

Hoxb8

24457

1.04

homeo box B8

Igf2 #

24483

−0.93

insulin-like growth factor 2

Igfbp2

25662

−0.51

insulin-like growth factor binding protein 2

Il16

116996

1.22

interleukin 16

Il18 #

29197

−1.29

interleukin 18

Itpr1

25262

0.79

inositol 1,4,5-trisphosphate receptor, type 1

Itpripl1

499885

1.36

inositol 1,4,5-trisphosphate receptor interacting protein-like 1

Ltbp1 #

59107

−0.72

latent transforming growth factor beta binding protein 1

Mal

25263

−0.78

mal, T-cell differentiation protein

Mapre2

679221

−1.01

microtubule-associated protein RP/EB family member 2-like

Mccc2

361884

−0.60

methylcrotonoyl-CoA carboxylase 2 (beta)

Mcm7

288532

0.80

minichromosome maintenance complex component 7

Mgmt

25332

−0.96

O-6-methylguanine-DNA methyltransferase

Myh11

24582

−0.51

myosin, heavy chain 11, smooth muscle

Ncaph

680089

2.40

non-SMC condensin I complex, subunit H

Nptx2

288475

−1.35

neuronal pentraxin II

P2rx4

29659

−0.88

purinergic receptor P2X, ligand-gated ion channel 4

P2ry12

64803

0.66

purinergic receptor P2Y, G-protein coupled, 12

Pld5

289270

−0.99

phospholipase D family, member 5

Ppm1k

312381

−0.52

protein phosphatase, Mg2+/Mn2+ dependent, 1 K

Ptgds

25526

−0.74

prostaglandin D2 synthase (brain)

Rbp4

25703

−1.48

retinol binding protein 4, plasma

Retsat

246298

1.86

retinol saturase (all trans retinol 13,14 reductase)

Snx14

315871

−0.66

sorting nexin 14

Sult1a1

83783

−0.85

sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1

Tlr3

364594

0.96

toll-like receptor 3

Ttr #

24856

−2.80

transthyretin

Vtn

29169

−0.55

vitronectin

Zbtb16

353227

−0.84

zinc finger and BTB domain containing 16

  1. #- genes associated with brain ischemia; ISIAH and WAG – rat strains used in the study