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Table 2 List of inactivated nutrient assimilation genes in the identified non-pathogenic Pseudomonas syringae strains

From: Comparative genomics and pathogenicity potential of members of the Pseudomonas syringae species complex on Prunus spp

Pathway

Gene

Pmp2CFBP 3800

Pmp 2

M300280

Pde

CFBP 3226

Pamygdali

CFBP 3205

Pathway is relevant for pathogenicity of:

Reference

Alginate biosynthesis

alg8

PSCFBP3800_01492

1-bp insertion, frame shift

+

+

P. syringae pv. syringae

[94]

α- ketoglutaric acid uptake

kgtP

PSCFBP3800_04544

+

4-bp insertion, frame shift

+

Xanthomonas oryzae pv. oryzae

[95]

Sugar alcohol utilization

mtlR

PSCFBP3800_03115

+

transposase insertion

+

Erwinia amylovora

[96]

Malate:quinone oxidoreductase

mqo2

PSCFBP3800_03180

+

transposase insertion

transposase insertion

P. syringae pv. tomato

[97]

  1. “+”: same as Pmp 2 CFBP 3800